# of markers with physical locations based on Build 34: 12638 # of markers with physical locations based on Build 35: 12751 # of markers that have physical position assigned with Build 35 only: 215 # of markers that have physical position assigned with Build 34 only: 102 Of the 12536 markers having physical positions assigned with both build 34 and 35, only 28 showed inconsistency on marker order between Build 34 and 35. The following are the 28 markers that showed inconsistency on marker order between Build 34 and 35. chr. marker Build34_position Build35_position 1 TSC0461871 21423906 21148075 1 D1S56 21483923 21116264 2 D2S323 2076622 2555767 2 D2S2393 2688832 1943458 2 TSC0334235 2694345 1938234 2 TSC0208582 2748801 1883778 2 D2S2245 2768602 1863806 2 TSC0351292 2801677 1830902 2 WIAF-2930 2848747 1783832 3 D3S2309 177267438 177105649 3 D3S2427 177267503 177105608 4 D4S1604 145679208 147356873 4 D4S2290 175840048 147491125 5 SS1484659 12558593 55575912 6 D6S2441 27737689 26007311 7 D7S1531 56165416 35694174 7 D7S489 71912479 74608742 7 D7S1507 81519286 34365106 7 D7S1503 102128126 25916159 11 D11S4146 63130299 3706452 11 D11S898 100561685 100594315 11 D11S35 100561784 100594291 11 D11S29 116993570 117025955 17 D17S719 22790394 25911830 19 D19S606 53942816 52665381 21 D21S1253 26356304 26356304 22 D22S427 16965930 16965930 23 DXS8031 68320069 67403839 The following are the 215 Markers that have physical position assigned with Build 35 only: chr. marker Build35_position 1 WIAF-768 919830 1 WIAF-3885 989675 1 D1S172 2422846 1 TSC0140173 3632202 1 TSC0036608 12802717 1 TSC1101326 16158597 1 D1S2697 16164847 1 D1S2144 17528973 1 TSC0148330 18158062 1 WIAF-1577 23946106 1 D1S1177 23971391 1 D1S2730 34886897 1 D1S3463 34952750 1 WIAF-2921 74914733 1 D1S1154 101092479 1 D1S2715 150397430 1 TSC0013978 155902788 1 D1S61 164135720 1 WIAF-3460 166559516 1 WIAF-2078 200187878 1 D1S1678 200263382 1 TSC0912136 218745732 1 TSC0132719 230985451 1 D1S1149 236473891 1 D1S1590 239423585 2 D2S1240 16084720 2 D2S1253 26083018 2 D2S414 43564103 2 D2S416 64173795 2 TSC1060483 73318997 2 WIAF-3894 80426330 2 WIAF-4095 85720394 2 D2S417 86899692 2 D2S1250 124184216 2 TSC0433465 145601816 2 D2S1773 148315539 2 TSC0036676 154762622 2 D2S1266 216918175 3 TSC0713606 3977784 3 D3S2301 25173796 3 TSC0926139 26444714 3 D3S11 34898186 3 TSC0259769 38027729 3 WIAF-2841 42546432 3 TSC0588298 57344912 3 TSC0530710 60837545 3 D3S3036 79975873 3 D3S2438 80045766 3 D3S3044 112445269 3 TSC0146662 123836742 3 D3S4528 193053402 4 D4S2957 3870456 4 D4S10 3905545 4 TSC0120306 6548845 4 D4S2363 79176661 4 D4S2284 87650646 4 D4S1638 98757162 4 TSC0215439 101020344 4 D4S3256 108243572 4 FGA 155866452 4 D4S3339 166147371 4 TSC0083511 168788171 4 D4S2431 175195397 4 TSC0271564 186352081 5 TSC0215081 222763 5 D5S2492 6254522 5 D5S810 13226978 5 D5S1473 23031085 5 D5S1711 60933402 5 D5S1478 118938794 5 D5S809 128966377 5 WIAF-1251 138298415 5 D5S1399 153509106 6 WIAF-2597 22314174 6 HLA-A 30021495 6 HLA-B 31429765 6 D6S1014 32299615 6 RDS 42773602 6 WIAF-2699 144809330 6 WIAF-1955 160168806 7 D7S1481 53214077 7 D7S1504 66662074 7 D7S1486 143479717 7 D7S61 154649100 7 WIAF-2817 154653144 7 WIAF-2815 154653272 8 TSC0121597 22789328 8 D8S571 37558841 8 D8S2331 37939739 8 WIAF-1362 37942955 8 D8S570 72917740 8 D8S572 73448529 8 D8S2328 75632587 8 TSC0028830 101474126 8 D8S1008 113415051 8 D8S342 123744906 8 D8S1011 127495509 8 WIAF-3231 127966254 8 TSC0005031 133184181 8 D8S1044 144131543 8 D8S315 144218310 9 D9S1686 4634417 9 TSC0145427 36447215 9 D9S303 82120599 9 D9S1112 132926055 9 ABO 133162307 9 TSC0365747 133296925 9 D9S1793 133427790 9 TSC0036762 136265334 10 D10S1243 32297198 10 TSC0121464 44075189 10 D10S225 47556006 10 D10S1122 54839814 10 WIAF-3711 70062381 10 WIAF-2805 72655476 10 D10S1123 108473007 10 D10S1121 111593233 11 D11S989 21704015 11 TSC0027198 33761133 11 TSC0132862 33781169 11 TSC0324893 37078487 11 TSC0389290 44840692 11 WIAF-4557 70823331 11 D11S4454 88791186 11 WIAF-3059 104009626 11 D11S1986 110728815 11 WIAF-3236 126897167 12 TSC0025944 6775678 12 A2M 9156997 12 D12S1698 30855986 12 D12S1302 85144122 12 D12S385 117944255 12 WIAF-3624 122424987 13 D13S787 23278738 13 WIAF-4138 27773794 13 D13S620 33727749 13 TSC0127790 40971693 13 WIAF-1063 46122773 13 D13S792 74050386 13 WIAF-2706 109553833 14 D14S780 18941952 14 D14S541 46696465 14 D14S540 68379470 14 WIAF-823 69654080 15 D15S817 22155356 15 D15S219 25579469 15 D15S560 28027952 15 TSC0011826 30984703 15 D15S842 42804647 15 D15S220 49861250 15 TSC0205194 55687351 15 TSC0131034 66510287 15 TSC1091534 72013761 15 D15S95 83869061 15 WIAF-1242 84093452 16 D16S85 175971 16 D16S2942 3648039 16 TSC0217539 15809279 16 TSC0038351 17851758 16 D16S3081 28400168 16 TSC0219880 49249865 16 D16S3033 71841198 16 TSC0139382 87914589 17 D17S1308 569917 17 D17S969 11785691 17 WIAF-1421 43255940 17 WIAF-1652 43256122 17 WIAF-1138 59753675 17 WIAF-2560 68791451 17 WIAF-3074 69671291 18 D18S1359 21679971 18 D18S877 24979188 18 D18S999 35937223 18 D18S849 53715574 18 D18S383 54899346 18 D18S969 60700040 18 TSC0139832 75369682 19 SS2088933 1407544 19 D19S427 6141785 19 WIAF-1162 6628956 19 D19S551 15552666 19 D19S411 15763202 19 D19S434 22559664 19 D19S426 34843764 19 TSC0130040 35971337 19 D19S113 37724300 19 D19S537 48723690 19 D19S585 55272918 20 D20S437 4478767 20 TSC0186559 5658065 20 TSC0138746 16541159 20 D20S1152 36665435 20 D20S445 46947027 20 D20S423 46947037 20 TSC0296508 47331624 20 TSC0126302 56505454 21 D21S1265 28651028 21 TSC0204901 46799010 22 NF2 28415412 22 TSC0103401 29091893 22 MB 34327382 22 MYH9 35002250 22 WIAF-1266 37455311 22 CYP2D6 40849257 22 D22S1153 44725030 22 D22S22 45812183 X DYS402 868410 X GATA2A12 910144 X DXS6814 1437086 X DXS9906 7240394 X DXS8090 36713618 X TSC0029872 39372910 X DXS9905 88668125 X DXS9904 89227395 X DXS2496 147401574 The following are the 102 Markers that have physical position assigned with Build 35 only: chr. marker Build34_position 1 D1S334 21253109 1 GATA153G01 46012778 1 WIAF-3072 72377056 1 D1S2125 154526817 1 D1S1663 206052650 1 D1S3729 219566226 2 D2S2976 925517 2 D2S1352 50808248 2 CD8A 86989474 2 WIAF-2173 87657185 2 SS2382577 119112820 2 D2S100 119329574 2 WIAF-4571 139219857 2 D2S1767 156146918 2 D2S98 207871517 2 GATA43F06 229739016 3 D3S4014 2422253 3 D3S3030 6241326 3 D3S4012 21924464 3 GATA121E06 81838280 3 D3S3574 104939716 3 D3S4546 163433505 3 SS1588387 196862561 4 D4S3355 53612779 5 D5S266 70476123 5 D5S1373 101254996 5 D5S299 101723422 5 D5S1385 114375627 5 D5S376 148322537 5 D5S193 159082582 7 D7S3051 18028843 7 D7S817 31878616 7 D7S1493 103987618 7 D7S78 107786723 7 GATA104 143115424 8 D8S133 21990777 8 D8S1141 65779662 8 D8S1179 125863668 9 D9S151 91114100 9 TSC1479820 131449610 10 D10S1234 2197272 10 D10S1153 4257848 10 D10S179 5550711 10 D10S172 9078163 10 WIAF-4028 17956892 10 D10S1247 35562142 10 D10S1232 62496263 10 D10S363 72328517 10 ATA105C09 96042780 10 D10S58 99493858 10 D10S1147 100896168 11 TPH 18021818 11 D11S4456 22595487 11 D11S614 118056612 12 D12S2209 9836095 12 D12S70 14778081 12 WIAF-1805 54091054 12 D12S810 116603465 12 TSC0171890 130635495 13 D13S885 87775145 14 D14S597 27212147 14 D14S599 32643836 14 D14S52 54215378 14 D14S34 86464143 15 D15S101 47001331 15 ATA40F07 79536259 15 WIAF-3106 84099113 16 SS1351601 282192 16 D16S287 17875344 16 GATA61C06 52094505 16 SS1482987 71054650 17 D17S34 103005 17 D17S126 3268518 17 D17S736 40320082 18 D18S3 5862481 18 D18S16 8027609 18 D18S974 31385870 18 ATA24G09 32586906 18 D18S13 50962789 18 D18S41 53155761 18 GATA2E08 61549129 18 D18S1361 67525567 18 D18S1374 68911470 19 D19S540 52198920 19 TSC0163247 60169296 20 D20S1084 17721742 20 D20S64 59282176 21 D21S120 14684023 21 D21S415 15764912 21 D21S2052 27740350 21 D21S17 35890850 21 D21S15 40678209 21 D21S198 41395757 21 D21S212 42038586 X DXS349 84659293 X DXYS1X 87370855 X SS1705625 91244260 X DXS1153 101031681 X DXS100 126453933 X DXS294 136537049 X DXS292 141183273 X DXS297 144671610