| Gene | GeneID | Cytoband | Start Position (bp) | End Position (bp) | Size (bp) | Status | Description |
| ABHD10 | 55347 | 3q13.2 | 111697828 | 111712210 | 14382 | VALIDATED | abhydrolase domain containing 10 |
| ABI3BP | 25890 | 3q12 | 100468179 | 100712334 | 244155 | VALIDATED | ABI family, member 3 (NESH) binding protein |
| ABTB1 | 80325 | 3q21 | 127391781 | 127399769 | 7988 | REVIEWED | ankyrin repeat and BTB (POZ) domain containing 1 |
| ACAD11 | 84129 | 3q22.1 | 132276982 | 132378975 | 101993 | VALIDATED | acyl-CoA dehydrogenase family, member 11 |
| ACAD9 | 28976 | 3q21.3 | 128598333 | 128631957 | 33624 | REVIEWED | acyl-CoA dehydrogenase family, member 9 |
| ACPP | 55 | 3q21-q23 | 132036211 | 132087146 | 50935 | REVIEWED | acid phosphatase, prostate |
| ACTR3P3 | 100128020 | 3q12.2 | 100881938 | 100882883 | 945 | INFERRED | ARP3 actin-related protein 3 homolog (yeast) pseudogene 3 |
| ADCY5 | 111 | 3q13.2-q21 | 123003399 | 123167392 | 163993 | REVIEWED | adenylate cyclase 5 |
| ADPRH | 141 | 3q13.31-q13.33 | 119298523 | 119308792 | 10269 | REVIEWED | ADP-ribosylarginine hydrolase |
| AGGF1P3 | 391552 | 3p12.3 | 75702601 | 75704732 | 2131 | INFERRED | angiogenic factor with G patch and FHA domains 1 pseudogene 3 |
| AKR1B1P2 | 236 | 3p12 | 74185078 | 74186739 | 1661 | INFERRED | aldo-keto reductase family 1, member B1 pseudogene 2 |
| ALCAM | 214 | 3q13.1 | 105085713 | 105295744 | 210031 | VALIDATED | activated leukocyte cell adhesion molecule |
| ALDH1L1 | 10840 | 3q21.3 | 125822408 | 125899485 | 77077 | REVIEWED | aldehyde dehydrogenase 1 family, member L1 |
| ALG1L | 200810 | 3q21.2 | 125648118 | 125655882 | 7764 | VALIDATED | asparagine-linked glycosylation 1-like |
| ALG1L2 | 644974 | 3q22.1 | 129800674 | 129817233 | 16559 | VALIDATED | asparagine-linked glycosylation 1-like 2 |
| AMOTL2 | 51421 | 3q21-q22 | 134074190 | 134093406 | 19216 | REVIEWED | angiomotin like 2 |
| ANAPC13 | 25847 | 3q22.2 | 134196546 | 134204865 | 8319 | REVIEWED | anaphase promoting complex subunit 13 |
| ARGFX | 503582 | 3q13.33 | 121286778 | 121309469 | 22691 | VALIDATED | arginine-fifty homeobox |
| ARHGAP31 | 57514 | 3q13.33 | 119013220 | 119138323 | 125103 | REVIEWED | Rho GTPase activating protein 31 |
| ARL13B | 200894 | 3q11.1 | 93698983 | 93774522 | 75539 | REVIEWED | ADP-ribosylation factor-like 13B |
| ARL6 | 84100 | 3q11.2 | 97483595 | 97517373 | 33778 | REVIEWED | ADP-ribosylation factor-like 6 |
| ARL6IP5 | 10550 | 3p14 | 69134090 | 69155239 | 21149 | REVIEWED | ADP-ribosylation-like factor 6 interacting protein 5 |
| ARVP6125 | 442092 | 3q22.1 | 129762156 | 129763668 | 1512 | MODEL | hypothetical LOC442092 |
| ASTE1 | 28990 | 3q22.1 | 130732721 | 130745646 | 12925 | VALIDATED | asteroid homolog 1 (Drosophila) |
| ATG3 | 64422 | 3q13.2 | 112251359 | 112280485 | 29126 | PROVISIONAL | ATG3 autophagy related 3 homolog (S. cerevisiae) |
| ATP2C1 | 27032 | 3q22.1 | 130613434 | 130735556 | 122122 | REVIEWED | ATPase, Ca++ transporting, type 2C, member 1 |
| ATP6V1A | 523 | 3q13.31 | 113465908 | 113530903 | 64995 | REVIEWED | ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A |
| B4GALT4 | 8702 | 3q13.3 | 118930589 | 118959752 | 29163 | REVIEWED | UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4 |
| BBX | 56987 | 3q13.1 | 107241783 | 107530050 | 288267 | VALIDATED | bobby sox homolog (Drosophila) |
| BFSP2 | 8419 | 3q22.1 | 133118790 | 133194056 | 75266 | REVIEWED | beaded filament structural protein 2, phakinin |
| BOC | 91653 | 3q13.2 | 112931375 | 113006306 | 74931 | VALIDATED | Boc homolog (mouse) |
| BTF3P16 | 643412 | 3q12.3 | 101175829 | 101176690 | 861 | INFERRED | basic transcription factor 3 pseudogene 16 |
| BTLA | 151888 | 3q13.2 | 112182813 | 112218408 | 35595 | VALIDATED | B and T lymphocyte associated |
| BZW1P2 | 151579 | 3q13.31 | 116363265 | 116365574 | 2309 | VALIDATED | basic leucine zipper and W2 domains 1 pseudogene 2 |
| C3orf1 | 51300 | 3q13.33 | 119217368 | 119243128 | 25760 | VALIDATED | chromosome 3 open reading frame 1 |
| C3orf15 | 89876 | 3q12-q13.3 | 119421869 | 119485949 | 64080 | VALIDATED | chromosome 3 open reading frame 15 |
| C3orf17 | 25871 | 3q13.2 | 112721291 | 112738555 | 17264 | VALIDATED | chromosome 3 open reading frame 17 |
| C3orf22 | 152065 | 3q21.3 | 126268519 | 126277758 | 9239 | PREDICTED | chromosome 3 open reading frame 22 |
| C3orf25 | 90288 | 3q21.3 | 129120164 | 129147494 | 27330 | PROVISIONAL | chromosome 3 open reading frame 25 |
| C3orf26 | 84319 | 3q12.1 | 99536678 | 99897476 | 360798 | VALIDATED | chromosome 3 open reading frame 26 |
| C3orf27 | 23434 | 3q21 | 128290843 | 128294929 | 4086 | VALIDATED | chromosome 3 open reading frame 27 |
| C3orf30 | 152405 | 3q13.32 | 118864997 | 118870302 | 5305 | VALIDATED | chromosome 3 open reading frame 30 |
| C3orf36 | 80111 | 3q22.1 | 133646989 | 133648656 | 1667 | VALIDATED | chromosome 3 open reading frame 36 |
| C3orf37 | 56941 | 3q21.3 | 128997684 | 129024136 | 26452 | VALIDATED | chromosome 3 open reading frame 37 |
| C3orf38 | 285237 | 3p11.1 | 88198893 | 88207115 | 8222 | VALIDATED | chromosome 3 open reading frame 38 |
| C3orf46 | 255330 | 3q21.3 | 126380924 | 126390782 | 9858 | VALIDATED | nucleoporin 210kDa pseudogene |
| C3orf47 | 339942 | 3q21.3 | 129035114 | 129043412 | 8298 | VALIDATED | chromosome 3 open reading frame 47 |
| C3orf52 | 79669 | 3q13.2 | 111805182 | 111837073 | 31891 | VALIDATED | chromosome 3 open reading frame 52 |
| C3orf56 | 285311 | 3q21.3 | 126911974 | 126917025 | 5051 | MODEL | chromosome 3 open reading frame 56 |
| C3orf64 | 285203 | 3p14.1 | 69024368 | 69062774 | 38406 | PROVISIONAL | chromosome 3 open reading frame 64 |
| C3orf66 | 677779 | 3q13.13 | 108897012 | 108904108 | 7096 | VALIDATED | chromosome 3 open reading frame 66 |
| CADM2 | 253559 | 3p12.1 | 85008133 | 86123579 | 1115446 | VALIDATED | cell adhesion molecule 2 |
| CASR | 846 | 3q13 | 121903181 | 122005344 | 102163 | VALIDATED | calcium-sensing receptor |
| CBLB | 868 | 3q13.11 | 105377109 | 105587887 | 210778 | VALIDATED | Cas-Br-M (murine) ecotropic retroviral transforming sequence b |
| CBX5P1 | 100151661 | 3p11.1 | 88144432 | 88145154 | 722 | INFERRED | chromobox homolog 5 pseudogene 1 |
| CCDC137P | 642802 | 3p13 | 72136041 | 72136811 | 770 | INFERRED | coiled-coil domain containing 137 pseudogene |
| CCDC14 | 64770 | 3q21.1 | 123632269 | 123680255 | 47986 | VALIDATED | coiled-coil domain containing 14 |
| CCDC37 | 348807 | 3q21.3 | 126113782 | 126155398 | 41616 | VALIDATED | coiled-coil domain containing 37 |
| CCDC48 | 79825 | 3q21.3 | 128720472 | 128759585 | 39113 | VALIDATED | coiled-coil domain containing 48 |
| CCDC54 | 84692 | 3q13.12 | 107096188 | 107097481 | 1293 | PROVISIONAL | coiled-coil domain containing 54 |
| CCDC58 | 131076 | 3q21.1 | 122078436 | 122102074 | 23638 | VALIDATED | coiled-coil domain containing 58 |
| CCDC80 | 151887 | 3q13.2 | 112323407 | 112359977 | 36570 | VALIDATED | coiled-coil domain containing 80 |
| CCRL1 | 51554 | 3q22 | 132316094 | 132321382 | 5288 | REVIEWED | chemokine (C-C motif) receptor-like 1 |
| CD200 | 4345 | 3q12-q13 | 112051916 | 112081659 | 29743 | REVIEWED | CD200 molecule |
| CD200R1 | 131450 | 3q13.2 | 112641532 | 112693937 | 52405 | REVIEWED | CD200 receptor 1 |
| CD200R1L | 344807 | 3q13.2 | 112534556 | 112564797 | 30241 | VALIDATED | CD200 receptor 1-like |
| CD47 | 961 | 3q13.1-q13.2 | 107761941 | 107809935 | 47994 | REVIEWED | CD47 molecule |
| CD80 | 941 | 3q13.3-q21 | 119243140 | 119278481 | 35341 | VALIDATED | CD80 molecule |
| CD86 | 942 | 3q21 | 121774221 | 121839983 | 65762 | REVIEWED | CD86 molecule |
| CD96 | 10225 | 3q13.13-q13.2 | 111260926 | 111371206 | 110280 | REVIEWED | CD96 molecule |
| CDV3 | 55573 | 3q22.1 | 133292434 | 133309118 | 16684 | VALIDATED | CDV3 homolog (mouse) |
| CEP63 | 80254 | 3q22.2 | 134204575 | 134293855 | 89280 | REVIEWED | centrosomal protein 63kDa |
| CEP97 | 79598 | 3q12.3 | 101443494 | 101486181 | 42687 | PROVISIONAL | centrosomal protein 97kDa |
| CGGBP1 | 8545 | 3p12-p11.1 | 88101100 | 88108146 | 7046 | VALIDATED | CGG triplet repeat binding protein 1 |
| CHCHD6 | 84303 | 3q21.3 | 126423118 | 126679244 | 256126 | PROVISIONAL | coiled-coil-helix-coiled-coil-helix domain containing 6 |
| CHMP2B | 25978 | 3p11.2 | 87276413 | 87304698 | 28285 | REVIEWED | chromatin modifying protein 2B |
| CHST13 | 166012 | 3q21.3 | 126243176 | 126262134 | 18958 | PROVISIONAL | carbohydrate (chondroitin 4) sulfotransferase 13 |
| CLDND1 | 56650 | 3q12.1 | 98234317 | 98241910 | 7593 | VALIDATED | claudin domain containing 1 |
| CNBP | 7555 | 3q21 | 128886658 | 128902810 | 16152 | REVIEWED | CCHC-type zinc finger, nucleic acid binding protein |
| CNTN3 | 5067 | 3p26 | 74311722 | 74570343 | 258621 | VALIDATED | contactin 3 (plasmacytoma associated) |
| COL6A4P2 | 646300 | 3q22.1 | 129931663 | 129992649 | 60986 | PROVISIONAL | collagen, type VI, alpha 4 pseudogene 2 |
| COL6A5 | 256076 | 3q22.1 | 130064359 | 130203688 | 139329 | REVIEWED | collagen, type VI, alpha 5 |
| COL6A6 | 131873 | 3q22.1 | 130279178 | 130395888 | 116710 | PROVISIONAL | collagen, type VI, alpha 6 |
| COL8A1 | 1295 | 3q12.3 | 99357454 | 99515158 | 157704 | REVIEWED | collagen, type VIII, alpha 1 |
| COPG | 22820 | 3q21.3 | 128968453 | 128996616 | 28163 | VALIDATED | coatomer protein complex, subunit gamma |
| COX17 | 10063 | 3q13.33 | 119388372 | 119396243 | 7871 | REVIEWED | COX17 cytochrome c oxidase assembly homolog (S. cerevisiae) |
| CPNE4 | 131034 | 3q22.1 | 131253572 | 131753844 | 500272 | REVIEWED | copine IV |
| CPOX | 1371 | 3q12 | 98298290 | 98312455 | 14165 | REVIEWED | coproporphyrinogen oxidase |
| CRYBG3 | 131544 | 3q11.2 | 97540569 | 97663826 | 123257 | MODEL | beta-gamma crystallin domain containing 3 |
| CSRP2P | 1467 | 3q21.1 | 119249679 | 119250377 | 698 | INFERRED | cysteine and glycine-rich protein 2 pseudogene |
| CSTA | 1475 | 3q21 | 122044011 | 122060816 | 16805 | REVIEWED | cystatin A (stefin A) |
| CYP51P1 | 83528 | 3p12.2 | 82854162 | 82857307 | 3145 | INFERRED | cytochrome P450, family 51, pseudogene 1 |
| DCBLD2 | 131566 | 3q12.1|3 | 98514814 | 98620533 | 105719 | VALIDATED | discoidin, CUB and LCCL domain containing 2 |
| DHFRL1 | 200895 | 3q11.1 | 93776770 | 93781660 | 4890 | VALIDATED | dihydrofolate reductase-like 1 |
| DIRC2 | 84925 | 3q21.1 | 122513901 | 122599986 | 86085 | REVIEWED | disrupted in renal carcinoma 2 |
| DNAJB8 | 165721 | 3q21.3 | 128181282 | 128186091 | 4809 | VALIDATED | DnaJ (Hsp40) homolog, subfamily B, member 8 |
| DNAJC13 | 23317 | 3q22.1 | 132136553 | 132257876 | 121323 | VALIDATED | DnaJ (Hsp40) homolog, subfamily C, member 13 |
| DPPA2 | 151871 | 3q13.13 | 109012635 | 109035364 | 22729 | VALIDATED | developmental pluripotency associated 2 |
| DPPA4 | 55211 | 3q13.13 | 109044988 | 109056419 | 11431 | VALIDATED | developmental pluripotency associated 4 |
| DRD3 | 1814 | 3q13.3 | 113847557 | 113897899 | 50342 | REVIEWED | dopamine receptor D3 |
| DTX3L | 151636 | 3q21.1 | 122283185 | 122294050 | 10865 | VALIDATED | deltex 3-like (Drosophila) |
| DZIP3 | 9666 | 3q13.13 | 108308337 | 108413693 | 105356 | VALIDATED | DAZ interacting protein 3, zinc finger |
| EAF2 | 55840 | 3q13.33 | 121554034 | 121605373 | 51339 | VALIDATED | ELL associated factor 2 |
| EBLN2 | 55096 | 3p13 | 73110810 | 73112488 | 1678 | PROVISIONAL | endogenous Borna-like N element-2 |
| EEFSEC | 60678 | 3q21.3 | 127872313 | 128127489 | 255176 | VALIDATED | eukaryotic elongation factor, selenocysteine-tRNA-specific |
| EIF4BP8 | 339881 | 3q21.1 | 122379460 | 122380768 | 1308 | INFERRED | eukaryotic translation initiation factor 4B pseudogene 8 |
| EIF4E3 | 317649 | 3p14 | 71728440 | 71803924 | 75484 | VALIDATED | eukaryotic translation initiation factor 4E family member 3 |
| ENO1P3 | 100419069 | - | 124580944 | 124582163 | 1219 | INFERRED | enolase 1, (alpha) pseudogene 3 |
| EPHA3 | 2042 | 3p11.2 | 89156674 | 89531284 | 374610 | REVIEWED | EPH receptor A3 |
| EPHA6 | 285220 | 3q11.2 | 96533425 | 97467786 | 934361 | PROVISIONAL | EPH receptor A6 |
| FAM162A | 26355 | 3q21.1 | 122103023 | 122128961 | 25938 | VALIDATED | family with sequence similarity 162, member A |
| FAM172B | 131909 | 3q12.3 | 101237716 | 101242724 | 5008 | PROVISIONAL | family with sequence similarity 172, member B pseudogene |
| FAM19A1 | 407738 | 3p14.1 | 68053454 | 68594772 | 541318 | REVIEWED | family with sequence similarity 19 (chemokine (C-C motif)-like), member A1 |
| FAM19A4 | 151647 | 3p14.1 | 68780917 | 68981711 | 200794 | REVIEWED | family with sequence similarity 19 (chemokine (C-C motif)-like), member A4 |
| FAM55C | 91775 | 3q12.3 | 101498029 | 101547075 | 49046 | VALIDATED | family with sequence similarity 55, member C |
| FAM86DP | 692099 | 3p12.3 | 75470703 | 75484266 | 13563 | VALIDATED | family with sequence similarity 86, member D, pseudogene |
| FBXO40 | 51725 | 3q13.33 | 121312170 | 121349139 | 36969 | VALIDATED | F-box protein 40 |
| FILIP1L | 11259 | 3q12.1 | 99551988 | 99833349 | 281361 | VALIDATED | filamin A interacting protein 1-like |
| FLJ22763 | 401081 | 3q13.13 | 108855561 | 108868956 | 13395 | VALIDATED | hypothetical LOC401081 |
| FLJ25363 | 401082 | 3q13.13 | 109128837 | 109214014 | 85177 | PREDICTED | hypothetical LOC401082 |
| FOXP1 | 27086 | 3p14.1 | 71004736 | 71633140 | 628404 | REVIEWED | forkhead box P1 |
| FRG2C | 100288801 | 3p12.3 | 75713487 | 75716368 | 2881 | PROVISIONAL | FSHD region gene 2 family, member C |
| FRMD4B | 23150 | 3p14.1 | 69219146 | 69435430 | 216284 | VALIDATED | FERM domain containing 4B |
| FSTL1 | 11167 | 3q13.33 | 120113061 | 120169918 | 56857 | REVIEWED | follistatin-like 1 |
| FTH1P4 | 2499 | 3q21.3 | 128483149 | 128484060 | 911 | REVIEWED | ferritin, heavy polypeptide 1 pseudogene 4 |
| GABRR3 | 200959 | 3q11.2 | 97705527 | 97753831 | 48304 | PROVISIONAL | gamma-aminobutyric acid (GABA) receptor, rho 3 |
| GAP43 | 2596 | 3q13.1-q13.2 | 115342151 | 115440334 | 98183 | REVIEWED | growth associated protein 43 |
| GAPDHP50 | 100421236 | - | 89096595 | 89097582 | 987 | INFERRED | glyceraldehyde 3 phosphate dehydrogenase pseudogene 50 |
| GATA2 | 2624 | 3q21.3 | 128198265 | 128212030 | 13765 | REVIEWED | GATA binding protein 2 |
| GBE1 | 2632 | 3p12.3 | 81538850 | 81810950 | 272100 | REVIEWED | glucan (1,4-alpha-), branching enzyme 1 |
| GCET2 | 257144 | 3q13.2 | 111839688 | 111852152 | 12464 | REVIEWED | germinal center expressed transcript 2 |
| GMFBP1 | 100499251 | 3q12.2 | 100383894 | 100384320 | 426 | INFERRED | glia maturation factor, beta pseudogene 1 |
| GOLGB1 | 2804 | 3q13 | 121382048 | 121468602 | 86554 | VALIDATED | golgin B1 |
| GP9 | 2815 | 3q21.3 | 128779645 | 128781253 | 1608 | REVIEWED | glycoprotein IX (platelet) |
| GPR128 | 84873 | 3q12.2 | 100328433 | 100414323 | 85890 | VALIDATED | G protein-coupled receptor 128 |
| GPR156 | 165829 | 3q13.33 | 119884328 | 119963142 | 78814 | VALIDATED | G protein-coupled receptor 156 |
| GPR15 | 2838 | 3q11.2-q13.1 | 98250878 | 98251960 | 1082 | PROVISIONAL | G protein-coupled receptor 15 |
| GPR27 | 2850 | 3p21-p14 | 71803201 | 71804328 | 1127 | PROVISIONAL | G protein-coupled receptor 27 |
| GRAMD1C | 54762 | 3q13.31 | 113557681 | 113666021 | 108340 | VALIDATED | GRAM domain containing 1C |
| GSK3B | 2932 | 3q13.3 | 119540800 | 119813264 | 272464 | REVIEWED | glycogen synthase kinase 3 beta |
| GSTO3P | 344813 | 3q22.1 | 130546482 | 130547277 | 795 | INFERRED | glutathione S-transferase omega 3, pseudogene |
| GTF2E1 | 2960 | 3q21-q24 | 120461558 | 120501916 | 40358 | VALIDATED | general transcription factor IIE, polypeptide 1, alpha 56kDa |
| GTPBP8 | 29083 | 3q13.2 | 112709800 | 112720221 | 10421 | VALIDATED | GTP-binding protein 8 (putative) |
| GUCA1C | 9626 | 3q13.1 | 108626642 | 108672677 | 46035 | VALIDATED | guanylate cyclase activator 1C |
| GXYLT2 | 727936 | 3p13 | 72937385 | 73024525 | 87140 | PROVISIONAL | glucoside xylosyltransferase 2 |
| H1FOO | 132243 | 3q22.1 | 129262057 | 129270204 | 8147 | REVIEWED | H1 histone family, member O, oocyte-specific |
| H1FX | 8971 | 3q21.3 | 129033614 | 129035120 | 1506 | REVIEWED | H1 histone family, member X |
| HCLS1 | 3059 | 3q13 | 121350246 | 121379791 | 29545 | VALIDATED | hematopoietic cell-specific Lyn substrate 1 |
| HEG1 | 57493 | 3q21.2 | 124684554 | 124774802 | 90248 | VALIDATED | HEG homolog 1 (zebrafish) |
| HGD | 3081 | 3q13.33 | 120347015 | 120401418 | 54403 | REVIEWED | homogentisate 1,2-dioxygenase |
| HHLA2 | 11148 | 3q13.13 | 108021332 | 108097126 | 75794 | PROVISIONAL | HERV-H LTR-associating 2 |
| HMGB1P36 | 100419968 | - | 70803005 | 70803724 | 719 | INFERRED | high mobility group box 1 pseudogene 36 |
| HMGB3P13 | 100289158 | 3q22.2 | 134156448 | 134157033 | 585 | INFERRED | high mobility group box 3 pseudogene 13 |
| HMGN1P7 | 100129555 | 3q11.2 | 93707476 | 93708266 | 790 | MODEL | high mobility group nucleosome binding domain 1 pseudogene 7 |
| HNRNPA1P23 | 100130002 | 3q21.1 | 122036456 | 122037450 | 994 | INFERRED | heterogeneous nuclear ribonucleoprotein A1 pseudogene 23 |
| HSP90AB5P | 442083 | 3p13 | 74150457 | 74152906 | 2449 | INFERRED | heat shock protein 90kDa alpha (cytosolic), class B member 5 (pseudogene) |
| HSPBAP1 | 79663 | 3q21.1 | 122458846 | 122512650 | 53804 | PROVISIONAL | HSPB (heat shock 27kDa) associated protein 1 |
| HTR1F | 3355 | 3p12 | 88031726 | 88042919 | 11193 | VALIDATED | 5-hydroxytryptamine (serotonin) receptor 1F |
| IFT122 | 55764 | 3q21 | 129158968 | 129239191 | 80223 | REVIEWED | intraflagellar transport 122 homolog (Chlamydomonas) |
| IFT57 | 55081 | 3q13.13 | 107879659 | 107941417 | 61758 | VALIDATED | intraflagellar transport 57 homolog (Chlamydomonas) |
| IGSF11 | 152404 | 3q13.32 | 118619477 | 118864898 | 245421 | VALIDATED | immunoglobulin superfamily, member 11 |
| ILDR1 | 286676 | 3q13.33 | 121706170 | 121741030 | 34860 | REVIEWED | immunoglobulin-like domain containing receptor 1 |
| IMPG2 | 50939 | 3q12.2-q12.3 | 100945288 | 101039419 | 94131 | REVIEWED | interphotoreceptor matrix proteoglycan 2 |
| IQCB1 | 9657 | 3q13.33|3q21.1 | 121488610 | 121553926 | 65316 | REVIEWED | IQ motif containing B1 |
| ISY1 | 57461 | 3q21.3 | 128848235 | 128880029 | 31794 | VALIDATED | ISY1 splicing factor homolog (S. cerevisiae) |
| ITGB5 | 3693 | 3q21.2 | 124481795 | 124606144 | 124349 | PROVISIONAL | integrin, beta 5 |
| KALRN | 8997 | 3q21.2 | 123813558 | 124440036 | 626478 | REVIEWED | kalirin, RhoGEF kinase |
| KBTBD12 | 166348 | 3q21.3 | 127641902 | 127706514 | 64612 | VALIDATED | kelch repeat and BTB (POZ) domain containing 12 |
| KBTBD8 | 84541 | 3p14 | 67048727 | 67061634 | 12907 | VALIDATED | kelch repeat and BTB (POZ) domain containing 8 |
| KIAA1257 | 57501 | 3q21.3 | 128689779 | 128712986 | 23207 | PREDICTED | KIAA1257 |
| KIAA1407 | 57577 | 3q13.31 | 113682984 | 113775460 | 92476 | PREDICTED | KIAA1407 |
| KIAA1524 | 57650 | 3q13.13 | 108268716 | 108308491 | 39775 | VALIDATED | KIAA1524 |
| KIAA2018 | 205717 | 3q13.2 | 113367232 | 113415493 | 48261 | VALIDATED | KIAA2018 |
| KLF15 | 28999 | 3q13-q21 | 126061478 | 126076236 | 14758 | VALIDATED | Kruppel-like factor 15 |
| KPNA1 | 3836 | 3q21 | 122140748 | 122233786 | 93038 | REVIEWED | karyopherin alpha 1 (importin alpha 5) |
| KRT8P25 | 402134 | 3p11.2 | 87372346 | 87374056 | 1710 | INFERRED | keratin 8 pseudogene 25 |
| KY | 339855 | 3q22.2 | 134318765 | 134369864 | 51099 | VALIDATED | kyphoscoliosis peptidase |
| LMOD3 | 56203 | 3p14.1 | 69156039 | 69171746 | 15707 | VALIDATED | leiomodin 3 (fetal) |
| LNP1 | 348801 | 3q12.2 | 100120037 | 100175170 | 55133 | VALIDATED | leukemia NUP98 fusion partner 1 |
| LOC100009676 | 100009676 | 3q12.3 | 101395274 | 101398061 | 2787 | VALIDATED | hypothetical LOC100009676 |
| LOC100125556 | 100125556 | 3q21.2 | 125635444 | 125648867 | 13423 | PROVISIONAL | family with sequence similarity 86, member A pseudogene |
| LOC100127892 | 100127892 | 3q13.31 | 113702868 | 113703502 | 634 | INFERRED | ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1 pseudogene |
| LOC100128035 | 100128035 | 3q13.2 | 111576840 | 111578440 | 1600 | NA | VGSA5840 |
| LOC100128045 | 100128045 | 3p12.3 | 75624698 | 75629733 | 5035 | MODEL | hypothetical LOC100128045 |
| LOC100128160 | 100128160 | 3p13 | 70246077 | 70264477 | 18400 | MODEL | hypothetical LOC100128160 |
| LOC100128179 | 100128179 | 3q13.11 | 103723221 | 103782333 | 59112 | MODEL | ras-related protein Rap-1b-like |
| LOC100128733 | 100128733 | 3q13.12 | 106567518 | 106568107 | 589 | INFERRED | FCF1 small subunit (SSU) processome component homolog (S. cerevisiae) pseudogene |
| LOC100129005 | 100129005 | 3p11.2 | 87643956 | 87644534 | 578 | INFERRED | apolipoprotein O pseudogene |
| LOC100129550 | 100129550 | 3q21.1 | 122605360 | 122611263 | 5903 | PREDICTED | hypothetical LOC100129550 |
| LOC100129557 | 100129557 | 3p12.2 | 80265390 | 80266504 | 1114 | MODEL | heterogeneous nuclear ribonucleoprotein A1-like |
| LOC100129707 | 100129707 | 3q13.33 | 119747560 | 119748905 | 1345 | REVIEWED | presenilin associated, rhomboid-like pseudogene |
| LOC100129736 | 100129736 | 3q11.2 | 96495779 | 96496531 | 752 | INFERRED | CDV3 homolog (mouse) pseudogene |
| LOC100129989 | 100129989 | 3q13.13 | 109106659 | 109116717 | 10058 | MODEL | uncharacterized protein C12orf29 homolog |
| LOC100130204 | 100130204 | 3p12.3 | 75132871 | 75134410 | 1539 | VALIDATED | non imprinted in Prader-Willi/Angelman syndrome 2 pseudogene |
| LOC100130326 | 100130326 | 3p12.1 | 84740820 | 84741742 | 922 | INFERRED | transmembrane protein 183A pseudogene |
| LOC100130327 | 100130327 | 3p11.1 | 88650211 | 88650552 | 341 | MODEL | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5-like |
| LOC100130333 | 100130333 | 3q22.1 | 129719098 | 129722233 | 3135 | MODEL | hypothetical LOC100130333 |
| LOC100130484 | 100130484 | 3q11.2 | 98152808 | 98153688 | 880 | INFERRED | ubiquitin family domain containing 1 pseudogene |
| LOC100130550 | 100130550 | 3q22.1 | 132105605 | 132106794 | 1189 | MODEL | g2/M phase-specific E3 ubiquitin-protein ligase-like |
| LOC100130701 | 100130701 | 3q13.33 | 120076665 | 120106964 | 30299 | MODEL | hypothetical protein LOC100130701 |
| LOC100130760 | 100130760 | 3q21.3 | 128764651 | 128765843 | 1192 | INFERRED | jumonji domain containing 4 pseudogene |
| LOC100130821 | 100130821 | 3p12.2 | 80212487 | 80214118 | 1631 | INFERRED | oxysterol binding protein-like 9 pseudogene |
| LOC100130963 | 100130963 | 3q11.2 | 98243877 | 98244156 | 279 | INFERRED | ribosomal protein L38 pseudogene |
| LOC100131117 | 100131117 | 3q13.31 | 114070682 | 114107819 | 37137 | MODEL | hypothetical LOC100131117 |
| LOC100131442 | 100131442 | 3q11.2 | 96472025 | 96473528 | 1503 | INFERRED | regulator of chromosome condensation 2 pseudogene |
| LOC100131568 | 100131568 | 3p14.1 | 69519576 | 69521682 | 2106 | INFERRED | RNA binding motif protein 43 pseudogene |
| LOC100131679 | 100131679 | 3q21.2 | 125581417 | 125606780 | 25363 | MODEL | hypothetical LOC100131679 |
| LOC100131901 | 100131901 | 3p12.3 | 75428323 | 75428649 | 326 | MODEL | putative uncharacterized protein UNQ6125/PRO20090-like |
| LOC100132481 | 100132481 | 3q21.3 | 126426195 | 126427493 | 1298 | MODEL | hypothetical LOC100132481 |
| LOC100287639 | 100287639 | 3q11.2 | 95373814 | 95374561 | 747 | INFERRED | methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene |
| LOC100287852 | 100287852 | 3q12.3 | 101129792 | 101133477 | 3685 | MODEL | protein FAM136A-like |
| LOC100287880 | 100287880 | 3q12.3-q13.11 | 102959833 | 102960078 | 245 | INFERRED | NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa pseudogene |
| LOC100288654 | 100288654 | 3p14.1 | 67564364 | 67564747 | 383 | MODEL | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4-like |
| LOC100288721 | 100288721 | 3q13.13 | 108895291 | 108896213 | 922 | MODEL | hypothetical LOC100288721 |
| LOC100289000 | 100289000 | 3p11.1 | 89636112 | 89636792 | 680 | MODEL | ATP synthase subunit a-like |
| LOC100289095 | 100289095 | 3q22.1 | 131245309 | 131246006 | 697 | INFERRED | BCL2-like 12 (proline rich) pseudogene |
| LOC100289131 | 100289131 | 3p13 | 70800218 | 70800623 | 405 | INFERRED | cytochrome c oxidase subunit VIc pseudogene |
| LOC100302640 | 100302640 | 3q13.12 | 106828637 | 106959485 | 130848 | VALIDATED | hypothetical LOC100302640 |
| LOC100310850 | 100310850 | 3q21 | 125534351 | 125535130 | 779 | INFERRED | small nuclear ribonucleoprotein polypeptide C pseudogene |
| LOC100310851 | 100310851 | 3q21 | 129918554 | 129919336 | 782 | INFERRED | small nuclear ribonucleoprotein polypeptide C pseudogene |
| LOC100418920 | 100418920 | - | 98934070 | 98934877 | 807 | INFERRED | actin, gamma 1 pseudogene |
| LOC100419008 | 100419008 | - | 127002924 | 127003484 | 560 | INFERRED | proline rich 20B pseudogene |
| LOC100419070 | 100419070 | - | 129041881 | 129042819 | 938 | INFERRED | nucleoporin 210kDa pseudogene |
| LOC100419178 | 100419178 | - | 81661389 | 81661956 | 567 | INFERRED | SET nuclear oncogene pseudogene |
| LOC100419185 | 100419185 | - | 98501053 | 98502034 | 981 | INFERRED | PDZ and LIM domain 1 pseudogene |
| LOC100419755 | 100419755 | - | 120817955 | 120818754 | 799 | INFERRED | zinc finger protein 426 pseudogene |
| LOC100419877 | 100419877 | - | 108960354 | 108962007 | 1653 | INFERRED | bromodomain containing 7 pseudogene |
| LOC100419878 | 100419878 | - | 126343635 | 126344868 | 1233 | INFERRED | methyltransferase like 5 pseudogene |
| LOC100419966 | 100419966 | - | 125399431 | 125399945 | 514 | INFERRED | hypothetical LOC100419966 |
| LOC100419969 | 100419969 | - | 125399569 | 125400974 | 1405 | INFERRED | myosin light chain kinase pseudogene |
| LOC100420049 | 100420049 | - | 132365965 | 132369238 | 3273 | INFERRED | heat shock 70kDa protein 8 pseudogene |
| LOC100420144 | 100420144 | - | 124340557 | 124341379 | 822 | INFERRED | mediator of cell motility 1 pseudogene |
| LOC100420298 | 100420298 | - | 130646594 | 130647129 | 535 | INFERRED | makorin ring finger protein 1 pseudogene |
| LOC100420300 | 100420300 | - | 72978193 | 72978745 | 552 | INFERRED | ferritin, heavy polypeptide 1 pseudogene |
| LOC100420394 | 100420394 | - | 111352790 | 111353337 | 547 | INFERRED | 5'-nucleotidase, cytosolic III pseudogene |
| LOC100420473 | 100420473 | - | 99940127 | 99942702 | 2575 | INFERRED | dual specificity phosphatase 12 pseudogene |
| LOC100420527 | 100420527 | - | 93794755 | 93796018 | 1263 | INFERRED | retinoblastoma binding protein 4 pseudogene |
| LOC100420528 | 100420528 | - | 113604145 | 113604875 | 730 | INFERRED | dullard homolog (Xenopus laevis) pseudogene |
| LOC100420831 | 100420831 | - | 111904330 | 111904854 | 524 | INFERRED | chromosome 1 open reading frame 106 pseudogene |
| LOC100420832 | 100420832 | - | 130636866 | 130638043 | 1177 | INFERRED | cysteine and glycine-rich protein 2 pseudogene |
| LOC100421090 | 100421090 | - | 126485280 | 126486318 | 1038 | INFERRED | regulator of chromosome condensation 2 pseudogene |
| LOC100421154 | 100421154 | - | 134229369 | 134230243 | 874 | INFERRED | developmental pluripotency associated 4 pseudogene |
| LOC100421376 | 100421376 | - | 108044355 | 108045661 | 1306 | INFERRED | heterogeneous nuclear ribonucleoprotein A1 pseudogene |
| LOC100421437 | 100421437 | - | 125062983 | 125063641 | 658 | INFERRED | DnaJ (Hsp40) homolog, subfamily B, member 7 pseudogene |
| LOC100421499 | 100421499 | - | 128561596 | 128563211 | 1615 | INFERRED | MAP/microtubule affinity-regulating kinase 4 pseudogene |
| LOC100421508 | 100421508 | - | 129064253 | 129064972 | 719 | INFERRED | MAP/microtubule affinity-regulating kinase 2 pseudogene |
| LOC100421580 | 100421580 | - | 100629821 | 100631007 | 1186 | INFERRED | family with sequence similarity 175, member A pseudogene |
| LOC100421636 | 100421636 | - | 122313617 | 122322474 | 8857 | INFERRED | poly (ADP-ribose) polymerase family, member 14 pseudogene |
| LOC100421637 | 100421637 | - | 133479144 | 133481207 | 2063 | INFERRED | acyl-CoA synthetase long-chain family member 3 pseudogene |
| LOC100421670 | 100421670 | - | 117393162 | 117394104 | 942 | INFERRED | developmentally regulated GTP binding protein 1 pseudogene |
| LOC100421731 | 100421731 | - | 113638069 | 113639044 | 975 | INFERRED | vacuolar protein sorting 26 homolog A (S. pombe) pseudogene |
| LOC100421813 | 100421813 | - | 75495916 | 75540354 | 44438 | INFERRED | ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene |
| LOC100421816 | 100421816 | - | 125567066 | 125628257 | 61191 | INFERRED | ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene |
| LOC100422044 | 100422044 | - | 121075838 | 121076791 | 953 | INFERRED | actin related protein 2/3 complex, subunit 1A, 41kDa pseudogene |
| LOC100422385 | 100422385 | - | 109420337 | 109421142 | 805 | INFERRED | DIM1 dimethyladenosine transferase 1-like (S. cerevisiae) pseudogene |
| LOC100506362 | 100506362 | - | 97517923 | 97526596 | 8673 | MODEL | hypothetical LOC100506362 |
| LOC100506377 | 100506377 | - | 98699902 | 98701940 | 2038 | MODEL | hypothetical LOC100506377 |
| LOC100506400 | 100506400 | - | 99644490 | 99644734 | 244 | MODEL | UPF0197 transmembrane protein C11orf10 homolog |
| LOC100506487 | 100506487 | - | 106830332 | 106848845 | 18513 | MODEL | hypothetical LOC100506487 |
| LOC100506506 | 100506506 | - | 108820303 | 108829187 | 8884 | MODEL | hypothetical LOC100506506 |
| LOC100506555 | 100506555 | - | 110764162 | 110788242 | 24080 | MODEL | hypothetical LOC100506555 |
| LOC100506575 | 100506575 | - | 110866294 | 110912386 | 46092 | MODEL | hypothetical LOC100506575 |
| LOC100506591 | 100506591 | - | 112065553 | 112085485 | 19932 | MODEL | hypothetical LOC100506591 |
| LOC100506621 | 100506621 | - | 112315644 | 112319118 | 3474 | MODEL | hypothetical LOC100506621 |
| LOC100506673 | 100506673 | - | 114403427 | 114406469 | 3042 | MODEL | hypothetical LOC100506673 |
| LOC100506708 | 100506708 | - | 116078871 | 116088932 | 10061 | MODEL | hypothetical LOC100506708 |
| LOC100506724 | 100506724 | - | 116640278 | 116651085 | 10807 | MODEL | hypothetical LOC100506724 |
| LOC100506764 | 100506764 | - | 75717379 | 75719188 | 1809 | MODEL | double homeobox protein 4-like |
| LOC100506765 | 100506765 | - | 118661923 | 118666349 | 4426 | MODEL | hypothetical LOC100506765 |
| LOC100506784 | 100506784 | - | 119814477 | 119817871 | 3394 | MODEL | hypothetical LOC100506784 |
| LOC100506815 | 100506815 | - | 71619425 | 71623608 | 4183 | MODEL | hypothetical LOC100506815 |
| LOC100506826 | 100506826 | 3q21 | 123304403 | 123349667 | 45264 | MODEL | hypothetical LOC100506826 |
| LOC100506841 | 100506841 | - | 124443943 | 124445172 | 1229 | MODEL | hypothetical LOC100506841 |
| LOC100506857 | 100506857 | - | 124479943 | 124481532 | 1589 | MODEL | hypothetical LOC100506857 |
| LOC100506865 | 100506865 | - | 72712435 | 72713400 | 965 | MODEL | hypothetical LOC100506865 |
| LOC100506902 | 100506902 | - | 75779112 | 75781280 | 2168 | MODEL | hypothetical LOC100506902 |
| LOC100506907 | 100506907 | - | 126082705 | 126112485 | 29780 | MODEL | hypothetical LOC100506907 |
| LOC100506944 | 100506944 | - | 88387565 | 88514654 | 127089 | MODEL | hypothetical LOC100506944 |
| LOC100506995 | 100506995 | - | 128207952 | 128222050 | 14098 | MODEL | hypothetical LOC100506995 |
| LOC100507015 | 100507015 | - | 129565893 | 129568894 | 3001 | MODEL | hypothetical LOC100507015 |
| LOC100507032 | 100507032 | 3q21-q22 | 129612714 | 129627755 | 15041 | VALIDATED | hypothetical LOC100507032 |
| LOC100507083 | 100507083 | - | 130012180 | 130012605 | 425 | MODEL | ATP synthase lipid-binding protein, mitochondrial-like |
| LOC100507107 | 100507107 | - | 130724513 | 130734248 | 9735 | MODEL | hypothetical LOC100507107 |
| LOC100507134 | 100507134 | - | 131236675 | 131239724 | 3049 | MODEL | hypothetical LOC100507134 |
| LOC100507182 | 100507182 | - | 133491596 | 133493686 | 2090 | MODEL | hypothetical protein LOC100507182 |
| LOC100507210 | 100507210 | - | 133774094 | 133776492 | 2398 | MODEL | hypothetical LOC100507210 |
| LOC100507224 | 100507224 | - | 134151299 | 134183454 | 32155 | MODEL | hypothetical LOC100507224 |
| LOC151658 | 151658 | 3q13.12 | 107560509 | 107596915 | 36406 | VALIDATED | hypothetical LOC151658 |
| LOC151760 | 151760 | 3q13.13 | 110610877 | 110612317 | 1440 | MODEL | hypothetical LOC151760 |
| LOC152225 | 152225 | 3q12.3 | 101659703 | 101716770 | 57067 | PREDICTED | hypothetical LOC152225 |
| LOC201617 | 201617 | 3p14.2 | 72200408 | 72223490 | 23082 | MODEL | hypothetical LOC201617 |
| LOC255025 | 255025 | 3q11.2 | 94657107 | 94710172 | 53065 | VALIDATED | hypothetical LOC255025 |
| LOC285205 | 285205 | 3q13.12 | 107642475 | 107647754 | 5279 | VALIDATED | hypothetical LOC285205 |
| LOC285224 | 285224 | 3q21.3 | 128182437 | 128191160 | 8723 | VALIDATED | hypothetical LOC285224 |
| LOC285232 | 285232 | 3p12.1 | 87098348 | 87102020 | 3672 | INFERRED | phosphoribosyl pyrophosphate amidotransferase pseudogene |
| LOC285286 | 285286 | 3p14.2 | 72084670 | 72149578 | 64908 | MODEL | hypothetical LOC285286 |
| LOC285359 | 285359 | 3q12.3 | 101431278 | 101432260 | 982 | VALIDATED | phosducin-like 3 pseudogene |
| LOC339843 | 339843 | 3q12.1 | 98376646 | 98379411 | 2765 | INFERRED | WW domain containing E3 ubiquitin protein ligase 1 pseudogene |
| LOC339879 | 339879 | 3p12.3 | 75464218 | 75472067 | 7849 | INFERRED | asparagine-linked glycosylation 1 homolog pseudogene |
| LOC344593 | 344593 | 3q13.12 | 106823761 | 106825847 | 2086 | INFERRED | protein tyrosine phosphatase, non-receptor type 11 pseudogene |
| LOC344595 | 344595 | 3q13.12 | 106959539 | 107045811 | 86272 | VALIDATED | hypothetical LOC344595 |
| LOC344653 | 344653 | 3p11.1 | 88366241 | 88368171 | 1930 | INFERRED | ATP-binding cassette, sub-family F (GCN20), member 2 pseudogene |
| LOC344709 | 344709 | 3p13 | 73231455 | 73232558 | 1103 | INFERRED | coiled-coil domain containing 75 pseudogene |
| LOC375350 | 375350 | 3p14.1 | 68194142 | 68194923 | 781 | INFERRED | COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis) pseudogene |
| LOC389137 | 389137 | 3q11.2 | 94224397 | 94226494 | 2097 | INFERRED | armadillo repeat containing 10 pseudogene |
| LOC391556 | 391556 | 3q11.2 | 96285139 | 96286420 | 1281 | VALIDATED | retinoblastoma binding protein 4 pseudogene |
| LOC391559 | 391559 | 3q12.1 | 99944218 | 99944914 | 696 | INFERRED | vesicle transport through interaction with t-SNAREs homolog 1B (yeast) pseudogene |
| LOC391562 | 391562 | 3q13.11 | 104221545 | 104222960 | 1415 | INFERRED | ezrin pseudogene |
| LOC391566 | 391566 | 3q13.31 | 113822096 | 113822475 | 379 | MODEL | histone H2B type 1-D-like |
| LOC391578 | 391578 | 3q22.1 | 133209650 | 133210404 | 754 | INFERRED | MAF1 homolog (S. cerevisiae) pseudogene |
| LOC401076 | 401076 | 3p12.3 | 76483169 | 76484576 | 1407 | REVIEWED | CAP, adenylate cyclase-associated protein 1 (yeast) pseudogene |
| LOC440970 | 440970 | 3p12.1 | 84687556 | 84918726 | 231170 | VALIDATED | similar to MUF1 protein |
| LOC440973 | 440973 | 3q13.13 | 109634831 | 109635787 | 956 | INFERRED | nuclear transcription factor Y, beta pseudogene |
| LOC442087 | 442087 | 3q13.33 | 120025573 | 120026799 | 1226 | INFERRED | prostate tumor overexpressed 1 pseudogene |
| LOC642487 | 642487 | 3p14.1 | 69584789 | 69585690 | 901 | INFERRED | H1 histone family, member O, oocyte-specific pseudogene |
| LOC643255 | 643255 | 3p12.3 | 75707585 | 75708266 | 681 | MODEL | retinoic acid receptor responder protein 2-like |
| LOC644063 | 644063 | 3q11.2 | 96068398 | 96069787 | 1389 | INFERRED | heterogeneous nuclear ribonucleoprotein K pseudogene |
| LOC644662 | 644662 | 3q21.3 | 125985645 | 126010368 | 24723 | MODEL | hypothetical protein LOC644662 |
| LOC644681 | 644681 | 3q13.11 | 103257418 | 103259420 | 2002 | INFERRED | synovial sarcoma, X breakpoint 2 interacting protein pseudogene |
| LOC644950 | 644950 | 3q13.13 | 109128525 | 109130216 | 1691 | MODEL | histone H3.3-like |
| LOC645180 | 645180 | 3q13.31 | 113950248 | 113951868 | 1620 | INFERRED | KIAA1539 pseudogene |
| LOC645207 | 645207 | 3q13.31 | 114997942 | 114998896 | 954 | INFERRED | eukaryotic translation initiation factor 4E family member 2 pseudogene |
| LOC645852 | 645852 | 3q21.3 | 126390952 | 126392066 | 1114 | INFERRED | splicing factor 3a, subunit 2, 66kDa pseudogene |
| LOC646392 | 646392 | 3q22.1 | 132120097 | 132120636 | 539 | INFERRED | nuclear import 7 homolog (S. cerevisiae) pseudogene |
| LOC649024 | 649024 | 3q13.12 | 107046680 | 107048027 | 1347 | INFERRED | citrate synthase pseudogene |
| LOC651856 | 651856 | 3q21.2 | 125485060 | 125488202 | 3142 | MODEL | hypothetical LOC651856 |
| LOC653115 | 653115 | 3p12.3 | 75263610 | 75264799 | 1189 | INFERRED | heterogeneous nuclear ribonucleoprotein A3 pseudogene |
| LOC653712 | 653712 | 3q21.3 | 128580351 | 128590384 | 10033 | VALIDATED | intraflagellar transport 122 homolog (Chlamydomonas) pseudogene |
| LOC654340 | 654340 | 3p13 | 70174019 | 70175807 | 1788 | INFERRED | RNA-binding region (RNP1, RRM) containing 3 pseudogene |
| LOC728432 | 728432 | 3p11.1 | 88997548 | 89000075 | 2527 | INFERRED | NMDA receptor regulated 2 pseudogene |
| LOC728873 | 728873 | 3q13.31 | 116745545 | 116745886 | 341 | MODEL | hypothetical LOC728873 |
| LOC729375 | 729375 | 3q22.1 | 129816625 | 129830276 | 13651 | PROVISIONAL | family with sequence similarity 86, member A pseudogene |
| LOC729674 | 729674 | 3q22.1 | 131894178 | 131895655 | 1477 | INFERRED | proteasome (prosome, macropain) 26S subunit, ATPase, 2 pseudogene |
| LOC90246 | 90246 | 3q21.3 | 128226678 | 128229438 | 2760 | VALIDATED | hypothetical LOC90246 |
| LRRC58 | 116064 | 3q13.33 | 120043576 | 120068186 | 24610 | VALIDATED | leucine rich repeat containing 58 |
| LSAMP | 4045 | 3q13.2-q21 | 115521210 | 116164385 | 643175 | REVIEWED | limbic system-associated membrane protein |
| MARK2P3 | 100421507 | - | 129053373 | 129054148 | 775 | INFERRED | MAP/microtubule affinity-regulating kinase 2 pseudogene 3 |
| MARK2P6 | 100421500 | - | 128570463 | 128571851 | 1388 | INFERRED | MAP/microtubule affinity-regulating kinase 2 pseudogene 6 |
| MARK2P8 | 100421498 | - | 128467022 | 128468348 | 1326 | INFERRED | MAP/microtubule affinity-regulating kinase 2 pseudogene 8 |
| MBD4 | 8930 | 3q21.3 | 129149793 | 129158852 | 9059 | REVIEWED | methyl-CpG binding domain protein 4 |
| MCM2 | 4171 | 3q21 | 127317253 | 127341279 | 24026 | REVIEWED | minichromosome maintenance complex component 2 |
| MGLL | 11343 | 3q21.3 | 127407909 | 127542051 | 134142 | VALIDATED | monoglyceride lipase |
| MINA | 84864 | 3q11.2 | 97660661 | 97691295 | 30634 | VALIDATED | MYC induced nuclear antigen |
| MIR1280 | 100302200 | - | 128081008 | 128081101 | 93 | PROVISIONAL | microRNA 1280 |
| MIR1284 | 100302112 | - | 71591121 | 71591240 | 119 | VALIDATED | microRNA 1284 |
| MIR1324 | 100302212 | - | 75679914 | 75680009 | 95 | PROVISIONAL | microRNA 1324 |
| MIR198 | 406975 | 3q13.33 | 120114515 | 120114576 | 61 | PROVISIONAL | microRNA 198 |
| MIR3136 | 100422859 | - | 69098109 | 69098186 | 77 | PROVISIONAL | microRNA 3136 |
| MIR4272 | 100422941 | - | 67275888 | 67275951 | 63 | PROVISIONAL | microRNA 4272 |
| MIR4273 | 100422955 | - | 75787431 | 75787514 | 83 | PROVISIONAL | microRNA 4273 |
| MIR544B | 100422864 | - | 124451286 | 124451363 | 77 | PROVISIONAL | microRNA 544b |
| MIR548I1 | 100302204 | - | 125509247 | 125509395 | 148 | PROVISIONAL | microRNA 548i-1 |
| MIR567 | 693152 | 3q13.2 | 111831648 | 111831745 | 97 | PROVISIONAL | microRNA 567 |
| MIR568 | 693153 | - | 114035322 | 114035416 | 94 | PROVISIONAL | microRNA 568 |
| MITF | 4286 | 3p14.2-p14.1 | 69788586 | 70017488 | 228902 | REVIEWED | microphthalmia-associated transcription factor |
| MORC1 | 27136 | 3q13 | 108677086 | 108836993 | 159907 | REVIEWED | MORC family CW-type zinc finger 1 |
| MRPL3 | 11222 | 3q21-q23 | 131181045 | 131221829 | 40784 | REVIEWED | mitochondrial ribosomal protein L3 |
| MRPS17P3 | 359757 | 3p12.1 | 78574253 | 78574641 | 388 | INFERRED | mitochondrial ribosomal protein S17 pseudogene 3 |
| MTRNR2L12 | 100463498 | 3q11.2 | 96336030 | 96337067 | 1037 | VALIDATED | MT-RNR2-like 12 |
| MUC13 | 56667 | 3q21.2 | 124624289 | 124653580 | 29291 | VALIDATED | mucin 13, cell surface associated |
| MYH15 | 22989 | 3q13.13 | 108099216 | 108248169 | 148953 | VALIDATED | myosin, heavy chain 15 |
| MYLK | 4638 | 3q21 | 123331143 | 123603149 | 272006 | REVIEWED | myosin light chain kinase |
| MYLKP1 | 9430 | 3p13 | 75377699 | 75388223 | 10524 | INFERRED | myosin light chain kinase pseudogene 1 |
| NAA50 | 80218 | 3q13.2 | 113437841 | 113465096 | 27255 | VALIDATED | N(alpha)-acetyltransferase 50, NatE catalytic subunit |
| NAP1L1P3 | 100130335 | 3q13.33 | 120524713 | 120525589 | 876 | INFERRED | nucleosome assembly protein 1-like 1 pseudogene 3 |
| NCRNA00119 | 348808 | 3q22.1 | 132441186 | 132593050 | 151864 | PREDICTED | non-protein coding RNA 119 |
| NCRNA00295 | 285194 | 3q13.31 | 116428635 | 116435887 | 7252 | VALIDATED | non-protein coding RNA 295 |
| NDUFB4 | 4710 | 3q13.33 | 120315128 | 120321258 | 6130 | REVIEWED | NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa |
| NEK11 | 79858 | 3q22.1 | 130745694 | 131069309 | 323615 | REVIEWED | NIMA (never in mitosis gene a)- related kinase 11 |
| NFKBIZ | 64332 | 3p12-q12 | 101546834 | 101579869 | 33035 | REVIEWED | nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta |
| NIT2 | 56954 | 3q12.2 | 100053562 | 100074478 | 20916 | VALIDATED | nitrilase family, member 2 |
| NPHP3 | 27031 | 3q22.1 | 132399454 | 132441276 | 41822 | REVIEWED | nephronophthisis 3 (adolescent) |
| NR1I2 | 8856 | 3q12-q13.3 | 119499331 | 119537332 | 38001 | REVIEWED | nuclear receptor subfamily 1, group I, member 2 |
| NSUN3 | 63899 | 3q11.1 | 93781855 | 93845630 | 63775 | PROVISIONAL | NOP2/Sun domain family, member 3 |
| NUDT16 | 131870 | 3q22.1 | 131100515 | 131107674 | 7159 | VALIDATED | nudix (nucleoside diphosphate linked moiety X)-type motif 16 |
| NUDT16P1 | 152195 | 3q22.1 | 131080689 | 131083966 | 3277 | VALIDATED | nudix (nucleoside diphosphate linked moiety X)-type motif 16 pseudogene 1 |
| OR5AC1 | 81431 | 3q11.2 | 97783315 | 97784236 | 921 | INFERRED | olfactory receptor, family 5, subfamily AC, member 1 (gene/pseudogene) |
| OR5AC2 | 81050 | 3q12.1 | 97806017 | 97806946 | 929 | PROVISIONAL | olfactory receptor, family 5, subfamily AC, member 2 |
| OR5AC4P | 403271 | 3q11.2 | 97823598 | 97824513 | 915 | INFERRED | olfactory receptor, family 5, subfamily AC, member 4 pseudogene |
| OR5BM1P | 79491 | 3q11.2 | 97771737 | 97772662 | 925 | INFERRED | olfactory receptor, family 5, subfamily BM, member 1 pseudogene |
| OR5H14 | 403273 | 3q12.1 | 97868230 | 97869162 | 932 | PROVISIONAL | olfactory receptor, family 5, subfamily H, member 14 |
| OR5H15 | 403274 | 3q12.1 | 97887544 | 97888485 | 941 | PROVISIONAL | olfactory receptor, family 5, subfamily H, member 15 |
| OR5H1 | 26341 | 3q11.2 | 97851542 | 97852483 | 941 | PROVISIONAL | olfactory receptor, family 5, subfamily H, member 1 |
| OR5H2 | 79310 | 3q12.1 | 98001732 | 98002676 | 944 | PROVISIONAL | olfactory receptor, family 5, subfamily H, member 2 |
| OR5H3P | 79309 | 3q12.1 | 97926267 | 97927182 | 915 | INFERRED | olfactory receptor, family 5, subfamily H, member 3 pseudogene |
| OR5H4P | 79299 | 3q12.1 | 97940883 | 97941810 | 927 | INFERRED | olfactory receptor, family 5, subfamily H, member 4 pseudogene |
| OR5H5P | 79297 | 3q12.1 | 97916055 | 97916979 | 924 | INFERRED | olfactory receptor, family 5, subfamily H, member 5 pseudogene |
| OR5H6 | 79295 | 3q12.1 | 97983129 | 97984106 | 977 | PROVISIONAL | olfactory receptor, family 5, subfamily H, member 6 |
| OR5H7P | 79291 | 3q12.1 | 97957196 | 97958122 | 926 | INFERRED | olfactory receptor, family 5, subfamily H, member 7 pseudogene |
| OR5H8P | 79289 | 3q12.1 | 98030757 | 98031684 | 927 | INFERRED | olfactory receptor, family 5, subfamily H, member 8 pseudogene |
| OR5K1 | 26339 | 3q11.2 | 98188421 | 98189372 | 951 | PROVISIONAL | olfactory receptor, family 5, subfamily K, member 1 |
| OR5K2 | 402135 | 3q11.2 | 98216525 | 98217475 | 950 | PROVISIONAL | olfactory receptor, family 5, subfamily K, member 2 |
| OR5K3 | 403277 | 3q12.1 | 98109510 | 98110475 | 965 | PROVISIONAL | olfactory receptor, family 5, subfamily K, member 3 |
| OR5K4 | 403278 | 3q12.1 | 98072698 | 98073663 | 965 | PROVISIONAL | olfactory receptor, family 5, subfamily K, member 4 |
| OR7E100P | 81430 | 3q13.2 | 112243033 | 112244047 | 1014 | INFERRED | olfactory receptor, family 7, subfamily E, member 100 pseudogene |
| OR7E121P | 402133 | 3p12.3 | 75647801 | 75648823 | 1022 | INFERRED | olfactory receptor, family 7, subfamily E, member 121 pseudogene |
| OR7E129P | 391576 | 3q22.1 | 129740398 | 129741422 | 1024 | INFERRED | olfactory receptor, family 7, subfamily E, member 129 pseudogene |
| OR7E130P | 389144 | 3q21.2 | 125422229 | 125423191 | 962 | INFERRED | olfactory receptor, family 7, subfamily E, member 130 pseudogene |
| OR7E21P | 9432 | 3q21.1 | 129753331 | 129754384 | 1053 | INFERRED | olfactory receptor, family 7, subfamily E, member 21 pseudogene |
| OR7E22P | 9431 | 3p13 | 75405636 | 75406661 | 1025 | INFERRED | olfactory receptor, family 7, subfamily E, member 22 pseudogene |
| OR7E29P | 26644 | 3q21.2 | 125430979 | 125431923 | 944 | INFERRED | olfactory receptor, family 7, subfamily E, member 29 pseudogene |
| OR7E53P | 26478 | 3q21.2 | 125453336 | 125453991 | 655 | INFERRED | olfactory receptor, family 7, subfamily E, member 53 pseudogene |
| OR7E55P | 391548 | 3p12.3 | 75419563 | 75420513 | 950 | INFERRED | olfactory receptor, family 7, subfamily E, member 55 pseudogene |
| OR7E66P | 26614 | 3p13 | 75397394 | 75397915 | 521 | INFERRED | olfactory receptor, family 7, subfamily E, member 66 pseudogene |
| OR7E93P | 79282 | 3q21.2 | 125443277 | 125444447 | 1170 | INFERRED | olfactory receptor, family 7, subfamily E, member 93 pseudogene |
| OR7E97P | 79492 | 3q21.2 | 125465972 | 125466942 | 970 | INFERRED | olfactory receptor, family 7, subfamily E, member 97 pseudogene |
| OSBPL11 | 114885 | 3q21 | 125247702 | 125314381 | 66679 | REVIEWED | oxysterol binding protein-like 11 |
| PARP14 | 54625 | 3q21.1 | 122399672 | 122449687 | 50015 | VALIDATED | poly (ADP-ribose) polymerase family, member 14 |
| PARP15 | 165631 | 3q21.1 | 122296449 | 122355536 | 59087 | VALIDATED | poly (ADP-ribose) polymerase family, member 15 |
| PARP9 | 83666 | 3q21 | 122246757 | 122283523 | 36766 | VALIDATED | poly (ADP-ribose) polymerase family, member 9 |
| PCNP | 57092 | 3q12.3 | 101293042 | 101313281 | 20239 | PROVISIONAL | PEST proteolytic signal containing nuclear protein |
| PDIA5 | 10954 | 3q21.1 | 122785856 | 122880953 | 95097 | VALIDATED | protein disulfide isomerase family A, member 5 |
| PDZRN3 | 23024 | 3p13 | 73431652 | 73674072 | 242420 | PROVISIONAL | PDZ domain containing ring finger 3 |
| PHBP8 | 100418804 | - | 119510676 | 119511397 | 721 | INFERRED | prohibitin pseudogene 8 |
| PHF5DP | 450238 | 3q13.2 | 113080809 | 113081655 | 846 | INFERRED | PHD finger protein 5D pseudogene |
| PHLDB2 | 90102 | 3q13.2 | 111451327 | 111695364 | 244037 | VALIDATED | pleckstrin homology-like domain, family B, member 2 |
| PIK3R4 | 30849 | 3q22.1 | 130397778 | 130465696 | 67918 | VALIDATED | phosphoinositide-3-kinase, regulatory subunit 4 |
| PLA1A | 51365 | 3q13.13-q13.2 | 119316722 | 119348658 | 31936 | VALIDATED | phospholipase A1 member A |
| PLCXD2 | 257068 | 3q13.2 | 111393523 | 111565294 | 171771 | VALIDATED | phosphatidylinositol-specific phospholipase C, X domain containing 2 |
| PLXNA1 | 5361 | 3q21.3 | 126707437 | 126756235 | 48798 | VALIDATED | plexin A1 |
| PLXND1 | 23129 | 3q22.1 | 129274056 | 129325582 | 51526 | VALIDATED | plexin D1 |
| PODXL2 | 50512 | 3q21.3 | 127348039 | 127391652 | 43613 | VALIDATED | podocalyxin-like 2 |
| POGLUT1 | 56983 | 3q13.33 | 119187785 | 119213555 | 25770 | VALIDATED | protein O-glucosyltransferase 1 |
| POLQ | 10721 | 3q13.33 | 121150273 | 121264853 | 114580 | VALIDATED | polymerase (DNA directed), theta |
| POPDC2 | 64091 | 3q13.33 | 119360908 | 119379404 | 18496 | REVIEWED | popeye domain containing 2 |
| POU1F1 | 5449 | 3p11 | 87308783 | 87325737 | 16954 | REVIEWED | POU class 1 homeobox 1 |
| POU5F1P6 | 100009668 | 3q21.3 | 128393489 | 128395453 | 1964 | INFERRED | POU class 5 homeobox 1 pseudogene 6 |
| POU5F1P7 | 100009669 | 3q11.2 | 97838117 | 97838819 | 702 | INFERRED | POU class 5 homeobox 1 pseudogene 7 |
| PPATP1 | 100289640 | 3p12.1 | 87100345 | 87101888 | 1543 | INFERRED | phosphoribosyl pyrophosphate amidotransferase pseudogene 1 |
| PPIAP15 | 5487 | 3q13.13 | 109189927 | 109190726 | 799 | INFERRED | peptidylprolyl isomerase A (cyclophilin A) pseudogene 15 |
| PPP4R2 | 151987 | 3p13 | 73046119 | 73115011 | 68892 | PROVISIONAL | protein phosphatase 4, regulatory subunit 2 |
| PRKRIRP2 | 100422711 | - | 86061711 | 86064469 | 2758 | INFERRED | protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor) pseudogene 2 |
| PROK2 | 60675 | 3p13 | 71820806 | 71834357 | 13551 | REVIEWED | prokineticin 2 |
| PROS1 | 5627 | 3q11.2 | 93591881 | 93692934 | 101053 | REVIEWED | protein S (alpha) |
| PROSP | 5628 | 3p21-cen | 90250256 | 90291222 | 40966 | INFERRED | protein S pseudogene (beta) |
| PSMC1P1 | 151645 | 3p14.1 | 68684836 | 68686393 | 1557 | INFERRED | proteasome (prosome, macropain) 26S subunit, ATPase, 1 pseudogene 1 |
| PSMC1P6 | 643766 | 3p11.2 | 87679261 | 87680815 | 1554 | INFERRED | proteasome (prosome, macropain) 26S subunit, ATPase, 1 pseudogene 6 |
| PSMD12P | 317753 | 3p14 | 72925820 | 72927337 | 1517 | INFERRED | proteasome 26S subunit, non-ATPase, 12 pseudogene |
| PTPLB | 201562 | 3q21.1 | 123213363 | 123303924 | 90561 | PROVISIONAL | protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b |
| PVRL3 | 25945 | 3q13 | 110790865 | 110853062 | 62197 | PROVISIONAL | poliovirus receptor-related 3 |
| QTRTD1 | 79691 | 3q13.31 | 113775611 | 113807269 | 31658 | PROVISIONAL | queuine tRNA-ribosyltransferase domain containing 1 |
| RAB43 | 339122 | 3q21.3 | 128806418 | 128840619 | 34201 | VALIDATED | RAB43, member RAS oncogene family |
| RAB6B | 51560 | 3q22.1 | 133543079 | 133614691 | 71612 | VALIDATED | RAB6B, member RAS oncogene family |
| RAB7A | 7879 | 3q21.3 | 128444979 | 128533641 | 88662 | REVIEWED | RAB7A, member RAS oncogene family |
| RABL3 | 285282 | 3q13.33 | 120405528 | 120461384 | 55856 | VALIDATED | RAB, member of RAS oncogene family-like 3 |
| RETNLB | 84666 | 3q13.1 | 108474486 | 108476130 | 1644 | VALIDATED | resistin like beta |
| RFKP2 | 100132753 | 3q13.2 | 111747750 | 111750523 | 2773 | INFERRED | riboflavin kinase pseudogene 2 |
| RG9MTD1 | 54931 | 3q12.3 | 101280712 | 101285089 | 4377 | PROVISIONAL | RNA (guanine-9-) methyltransferase domain containing 1 |
| RHO | 6010 | 3q21-q24 | 129247482 | 129254187 | 6705 | REVIEWED | rhodopsin |
| RNU7-19P | 100147767 | 3p13 | 73076962 | 73077021 | 59 | INFERRED | RNA, U7 small nuclear 19 pseudogene |
| ROBO1 | 6091 | 3p12 | 78646388 | 79817059 | 1170671 | REVIEWED | roundabout, axon guidance receptor, homolog 1 (Drosophila) |
| ROBO2 | 6092 | 3p12.3 | 75955845 | 77699115 | 1743270 | REVIEWED | roundabout, axon guidance receptor, homolog 2 (Drosophila) |
| ROPN1 | 54763 | 3q21.1 | 123687878 | 123710199 | 22321 | PROVISIONAL | rhophilin associated tail protein 1 |
| ROPN1B | 152015 | 3q21.2 | 125688028 | 125702297 | 14269 | PROVISIONAL | rhophilin associated tail protein 1B |
| RPL10P7 | 442086 | 3q13.33 | 119354373 | 119354997 | 624 | INFERRED | ribosomal protein L10 pseudogene 7 |
| RPL13P8 | 100270928 | 3q13.13 | 108262221 | 108262722 | 501 | INFERRED | ribosomal protein L13 pseudogene 8 |
| RPL18AP8 | 644082 | 3q11.2 | 96338113 | 96338718 | 605 | INFERRED | ribosomal protein L18a pseudogene 8 |
| RPL19P7 | 100131527 | 3q12 | 98338920 | 98339540 | 620 | INFERRED | ribosomal protein L19 pseudogene 7 |
| RPL21P41 | 100271159 | 3p14.1 | 66687573 | 66687966 | 393 | INFERRED | ribosomal protein L21 pseudogene 41 |
| RPL23AP49 | 653236 | 3p12.3 | 75673837 | 75674304 | 467 | INFERRED | ribosomal protein L23a pseudogene 49 |
| RPL24 | 6152 | 3q12 | 101399934 | 101405563 | 5629 | REVIEWED | ribosomal protein L24 |
| RPL32P3 | 132241 | 3q21.3 | 129101677 | 129118282 | 16605 | PROVISIONAL | ribosomal protein L32 pseudogene 3 |
| RPL32P7 | 391560 | 3q12.3 | 101318083 | 101318488 | 405 | INFERRED | ribosomal protein L32 pseudogene 7 |
| RPL34P9 | 100271002 | 3q13.33 | 120231701 | 120232036 | 335 | INFERRED | ribosomal protein L34 pseudogene 9 |
| RPL39P5 | 553117 | 3q22.1 | 134070581 | 134070985 | 404 | INFERRED | ribosomal protein L39 pseudogene 5 |
| RPL7AP11 | 728992 | 3q13.33 | 121212934 | 121213810 | 876 | INFERRED | ribosomal protein L7a pseudogene 11 |
| RPL7AP23 | 100271040 | 3p12.2 | 82368367 | 82368965 | 598 | INFERRED | ribosomal protein L7a pseudogene 23 |
| RPL7P15 | 100270850 | 3q21.1-q21.2 | 123870742 | 123871476 | 734 | REVIEWED | ribosomal protein L7 pseudogene 15 |
| RPL7P16 | 729677 | 3q22.1 | 131962304 | 131963130 | 826 | INFERRED | ribosomal protein L7 pseudogene 16 |
| RPLP0P8 | 100131151 | 3p14.1 | 68682646 | 68683550 | 904 | INFERRED | ribosomal protein, large, P0 pseudogene 8 |
| RPN1 | 6184 | 3q21.3 | 128338813 | 128369719 | 30906 | REVIEWED | ribophorin I |
| RPS10P4 | 728791 | 3q13.31 | 113569035 | 113569617 | 582 | INFERRED | ribosomal protein S10 pseudogene 4 |
| RPS12P6 | 100271054 | 3p12 | 78808128 | 78808519 | 391 | INFERRED | ribosomal protein S12 pseudogene 6 |
| RPS15AP16 | 100271358 | 3q21.3 | 128517683 | 128518044 | 361 | INFERRED | ribosomal protein S15a pseudogene 16 |
| RPS17P9 | 100130823 | 3q22.1 | 129703935 | 129717779 | 13844 | INFERRED | ribosomal protein S17 pseudogene 9 |
| RPS18P5 | 100131863 | 3q12.3 | 101295295 | 101295834 | 539 | INFERRED | ribosomal protein S18 pseudogene 5 |
| RPS18P6 | 100271076 | 3q11.2 | 94890940 | 94891221 | 281 | INFERRED | ribosomal protein S18 pseudogene 6 |
| RPS24P9 | 100132496 | 3q21.2 | 125506491 | 125507093 | 602 | INFERRED | ribosomal protein S24 pseudogene 9 |
| RPS26P21 | 100271105 | 3q13.32-q13.33 | 119017512 | 119017859 | 347 | INFERRED | ribosomal protein S26 pseudogene 21 |
| RPS26P22 | 100271112 | 3q13 | 124452265 | 124452601 | 336 | REVIEWED | ribosomal protein S26 pseudogene 22 |
| RPS27P12 | 100271117 | 3q21 | 128936879 | 128937215 | 336 | INFERRED | ribosomal protein S27 pseudogene 12 |
| RPS3AP14 | 729150 | 3q21.2 | 125513925 | 125514772 | 847 | INFERRED | ribosomal protein S3a pseudogene 14 |
| RPS3AP15 | 652670 | 3p12.3 | 75591256 | 75592104 | 848 | INFERRED | ribosomal protein S3a pseudogene 15 |
| RPSAP29 | 389141 | 3q13.13 | 110401063 | 110402084 | 1021 | INFERRED | ribosomal protein SA pseudogene 29 |
| RUVBL1 | 8607 | 3q21 | 127799800 | 127842671 | 42871 | VALIDATED | RuvB-like 1 (E. coli) |
| RYBP | 23429 | 3p13 | 72423744 | 72495774 | 72030 | VALIDATED | RING1 and YY1 binding protein |
| RYK | 6259 | 3q22 | 133875978 | 133969586 | 93608 | REVIEWED | RYK receptor-like tyrosine kinase |
| SEC22A | 26984 | 3q21.1 | 122920774 | 122992983 | 72209 | REVIEWED | SEC22 vesicle trafficking protein homolog A (S. cerevisiae) |
| SEC61A1 | 29927 | 3q21.3 | 127771212 | 127790526 | 19314 | REVIEWED | Sec61 alpha 1 subunit (S. cerevisiae) |
| SEMA5B | 54437 | 3q21.1 | 122628043 | 122746576 | 118533 | VALIDATED | sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B |
| SENP7 | 57337 | 3q12 | 101043117 | 101232085 | 188968 | VALIDATED | SUMO1/sentrin specific peptidase 7 |
| SHQ1 | 55164 | 3p13 | 72798428 | 72897598 | 99170 | VALIDATED | SHQ1 homolog (S. cerevisiae) |
| SIDT1 | 54847 | 3q13.2 | 113251218 | 113348422 | 97204 | VALIDATED | SID1 transmembrane family, member 1 |
| SLC12A8 | 84561 | 3q21.2 | 124801480 | 124931609 | 130129 | REVIEWED | solute carrier family 12 (potassium/chloride transporters), member 8 |
| SLC15A2 | 6565 | 3q13.33 | 121613171 | 121663034 | 49863 | VALIDATED | solute carrier family 15 (H+/peptide transporter), member 2 |
| SLC35A5 | 55032 | 3q13.2 | 112280895 | 112303003 | 22108 | PROVISIONAL | solute carrier family 35, member A5 |
| SLC41A3 | 54946 | 3q21.2 | 125725200 | 125820391 | 95191 | VALIDATED | solute carrier family 41, member 3 |
| SLC9A10 | 285335 | 3q13.2 | 111859752 | 112013074 | 153322 | VALIDATED | solute carrier family 9, member 10 |
| SLCO2A1 | 6578 | 3q21 | 133651540 | 133748920 | 97380 | VALIDATED | solute carrier organic anion transporter family, member 2A1 |
| SNORA58 | 677836 | 3q21.2 | 131197941 | 131198077 | 136 | PROVISIONAL | small nucleolar RNA, H/ACA box 58 |
| SNORA7B | 677797 | 3q21.3 | 129116053 | 129116191 | 138 | PROVISIONAL | small nucleolar RNA, H/ACA box 7B |
| SNX4 | 8723 | 3q21.2 | 125165494 | 125239058 | 73564 | REVIEWED | sorting nexin 4 |
| SPICE1 | 152185 | 3q13.2 | 113161565 | 113234034 | 72469 | VALIDATED | spindle and centriole associated protein 1 |
| SRPRB | 58477 | 3q22.1 | 133502877 | 133540336 | 37459 | REVIEWED | signal recognition particle receptor, B subunit |
| SRRM1P2 | 100420834 | - | 83986207 | 83988189 | 1982 | INFERRED | serine/arginine repetitive matrix 1 pseudogene 2 |
| ST3GAL6 | 10402 | 3q12.1 | 98451572 | 98513237 | 61665 | PROVISIONAL | ST3 beta-galactoside alpha-2,3-sialyltransferase 6 |
| STX19 | 415117 | 3q11 | 93733213 | 93747454 | 14241 | PROVISIONAL | syntaxin 19 |
| STXBP5L | 9515 | 3q13.33 | 120627050 | 121143608 | 516558 | VALIDATED | syntaxin binding protein 5-like |
| SUCLG2 | 8801 | 3p14.1 | 67410884 | 67705038 | 294154 | REVIEWED | succinate-CoA ligase, GDP-forming, beta subunit |
| TAGLN3 | 29114 | 3q13.2 | 111717586 | 111732735 | 15149 | VALIDATED | transgelin 3 |
| TBC1D23 | 55773 | 3q12.2 | 99979686 | 100044082 | 64396 | VALIDATED | TBC1 domain family, member 23 |
| TF | 7018 | 3q22.1 | 133464977 | 133497850 | 32873 | REVIEWED | transferrin |
| TFG | 10342 | 3q12.2 | 100428160 | 100467811 | 39651 | REVIEWED | TRK-fused gene |
| TFP1 | 100129696 | 3q22.1 | 133393418 | 133394726 | 1308 | REVIEWED | transferrin pseudogene 1 |
| TIGIT | 201633 | 3q13.31 | 114012833 | 114029135 | 16302 | VALIDATED | T cell immunoreceptor with Ig and ITIM domains |
| TMCC1 | 23023 | 3q22.1 | 129366635 | 129612419 | 245784 | VALIDATED | transmembrane and coiled-coil domain family 1 |
| TMED10P2 | 100129727 | 3q21.3 | 128256860 | 128257474 | 614 | INFERRED | transmembrane emp24-like trafficking protein 10 (yeast) pseudogene 2 |
| TMEM108 | 66000 | 3q21 | 132757171 | 133116619 | 359448 | VALIDATED | transmembrane protein 108 |
| TMEM30C | 644444 | 3q12.1 | 99904668 | 99913030 | 8362 | PROVISIONAL | transmembrane protein 30C |
| TMEM39A | 55254 | 3q13.33 | 119149701 | 119182471 | 32770 | PROVISIONAL | transmembrane protein 39A |
| TMEM45A | 55076 | 3q12.2 | 100211463 | 100296285 | 84822 | PROVISIONAL | transmembrane protein 45A |
| TMF1 | 7110 | 3p21-p12 | 69068978 | 69101484 | 32506 | VALIDATED | TATA element modulatory factor 1 |
| TMPRSS7 | 344805 | 3q13.2 | 111758465 | 111800116 | 41651 | VALIDATED | transmembrane protease, serine 7 |
| TOMM70A | 9868 | 3q12.2 | 100082307 | 100120225 | 37918 | VALIDATED | translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae) |
| TOPBP1 | 11073 | 3q22.1 | 133319449 | 133380737 | 61288 | REVIEWED | topoisomerase (DNA) II binding protein 1 |
| TPRA1 | 131601 | 3q21.2 | 127291908 | 127309568 | 17660 | VALIDATED | transmembrane protein, adipocyte asscociated 1 |
| TRAT1 | 50852 | 3q13 | 108541631 | 108573714 | 32083 | VALIDATED | T cell receptor associated transmembrane adaptor 1 |
| TRH | 7200 | 3q13.3-q21 | 129693114 | 129696778 | 3664 | REVIEWED | thyrotropin-releasing hormone |
| TRNAE27P | 100189440 | 3q13.11 | 103879524 | 103879595 | 71 | INFERRED | transfer RNA glutamic acid 27 (anticodon CUC) pseudogene |
| TRNAQ42P | 100189489 | 3q13.12 | 106620878 | 106620949 | 71 | INFERRED | transfer RNA glutamine 42 (anticodon UUG) pseudogene |
| TXNRD3 | 114112 | 3q21.3 | 126325895 | 126373967 | 48072 | REVIEWED | thioredoxin reductase 3 |
| TXNRD3IT1 | 645840 | 3q21.3 | 126290622 | 126327398 | 36776 | PROVISIONAL | thioredoxin reductase 3 intronic transcript 1 |
| UBA3 | 9039 | 3p24.3-p13 | 69103881 | 69129524 | 25643 | REVIEWED | ubiquitin-like modifier activating enzyme 3 |
| UBA5 | 79876 | 3q22.1 | 132373290 | 132396944 | 23654 | REVIEWED | ubiquitin-like modifier activating enzyme 5 |
| UMPS | 7372 | 3q13 | 124449213 | 124468120 | 18907 | REVIEWED | uridine monophosphate synthetase |
| UNC93B3 | 285296 | 3p12.3 | 75668191 | 75673001 | 4810 | INFERRED | unc-93 homolog B3 pseudogene (C. elegans) |
| UPK1B | 7348 | 3q13.32 | 118892425 | 118924000 | 31575 | REVIEWED | uroplakin 1B |
| UQCRHP4 | 100128448 | 3p13 | 70189368 | 70189639 | 271 | INFERRED | ubiquinol-cytochrome c reductase hinge protein pseudogene 4 |
| UROC1 | 131669 | 3q21.3 | 126200008 | 126236616 | 36608 | REVIEWED | urocanase domain containing 1 |
| VDAC1P7 | 100310839 | - | 77365048 | 77366849 | 1801 | INFERRED | voltage-dependent anion channel 1 pseudogene 7 |
| VGLL3 | 389136 | 3p12.1 | 86987123 | 87040257 | 53134 | VALIDATED | vestigial like 3 (Drosophila) |
| WDR52 | 55779 | 3q13.2 | 113005777 | 113160361 | 154584 | VALIDATED | WD repeat domain 52 |
| WDR5B | 54554 | 3q21.1 | 122130700 | 122134882 | 4182 | REVIEWED | WD repeat domain 5B |
| WDR82P1 | 728505 | 3q11.2 | 94654443 | 94657128 | 2685 | INFERRED | WD repeat domain 82 pseudogene 1 |
| ZBED2 | 79413 | 3q13.2 | 111311747 | 111314166 | 2419 | VALIDATED | zinc finger, BED-type containing 2 |
| ZBTB11 | 27107 | 3q12.3 | 101368283 | 101395988 | 27705 | VALIDATED | zinc finger and BTB domain containing 11 |
| ZBTB20 | 26137 | 3q13.2 | 114056941 | 114866127 | 809186 | VALIDATED | zinc finger and BTB domain containing 20 |
| ZDHHC23 | 254887 | 3q13.31 | 113666748 | 113681829 | 15081 | VALIDATED | zinc finger, DHHC-type containing 23 |
| ZNF148 | 7707 | 3q21 | 124944513 | 125094198 | 149685 | VALIDATED | zinc finger protein 148 |
| ZNF654 | 55279 | 3p11.1 | 88188262 | 88193814 | 5552 | VALIDATED | zinc finger protein 654 |
| ZNF717 | 100131827 | 3p12.3 | 75786029 | 75834255 | 48226 | VALIDATED | zinc finger protein 717 |
| ZNF80 | 7634 | 3q13.3 | 113953478 | 113956425 | 2947 | VALIDATED | zinc finger protein 80 |
| ZNF90P1 | 7661 | 3q13 | 101076137 | 101077477 | 1340 | INFERRED | zinc finger protein 90 pseudogene 1 |
| ZPLD1 | 131368 | 3q12.3 | 102153859 | 102198685 | 44826 | PROVISIONAL | zona pellucida-like domain containing 1 |
| ZXDC | 79364 | 3q21.3 | 126156444 | 126194762 | 38318 | VALIDATED | ZXD family zinc finger C |