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| Gene | GeneID | Cytoband | Start Position (bp) | End Position (bp) | Size (bp) | Status | Description |
| ACTR3P3 | 100128020 | 3q12.2 | 100881938 | 100882883 | 945 | INFERRED | ARP3 actin-related protein 3 homolog (yeast) pseudogene 3 |
| AGGF1P3 | 391552 | 3p12.3 | 75702601 | 75704732 | 2131 | INFERRED | angiogenic factor with G patch and FHA domains 1 pseudogene 3 |
| AKR1B1P2 | 236 | 3p12 | 74185078 | 74186739 | 1661 | INFERRED | aldo-keto reductase family 1, member B1 pseudogene 2 |
| ARVP6125 | 442092 | 3q22.1 | 129762156 | 129763668 | 1512 | MODEL | hypothetical LOC442092 |
| BTF3P16 | 643412 | 3q12.3 | 101175829 | 101176690 | 861 | INFERRED | basic transcription factor 3 pseudogene 16 |
| C3orf22 | 152065 | 3q21.3 | 126268519 | 126277758 | 9239 | PREDICTED | chromosome 3 open reading frame 22 |
| C3orf56 | 285311 | 3q21.3 | 126911974 | 126917025 | 5051 | MODEL | chromosome 3 open reading frame 56 |
| CBX5P1 | 100151661 | 3p11.1 | 88144432 | 88145154 | 722 | INFERRED | chromobox homolog 5 pseudogene 1 |
| CCDC137P | 642802 | 3p13 | 72136041 | 72136811 | 770 | INFERRED | coiled-coil domain containing 137 pseudogene |
| CRYBG3 | 131544 | 3q11.2 | 97540569 | 97663826 | 123257 | MODEL | beta-gamma crystallin domain containing 3 |
| CSRP2P | 1467 | 3q21.1 | 119249679 | 119250377 | 698 | INFERRED | cysteine and glycine-rich protein 2 pseudogene |
| CYP51P1 | 83528 | 3p12.2 | 82854162 | 82857307 | 3145 | INFERRED | cytochrome P450, family 51, pseudogene 1 |
| EIF4BP8 | 339881 | 3q21.1 | 122379460 | 122380768 | 1308 | INFERRED | eukaryotic translation initiation factor 4B pseudogene 8 |
| ENO1P3 | 100419069 | - | 124580944 | 124582163 | 1219 | INFERRED | enolase 1, (alpha) pseudogene 3 |
| FLJ25363 | 401082 | 3q13.13 | 109128837 | 109214014 | 85177 | PREDICTED | hypothetical LOC401082 |
| GAPDHP50 | 100421236 | - | 89096595 | 89097582 | 987 | INFERRED | glyceraldehyde 3 phosphate dehydrogenase pseudogene 50 |
| GMFBP1 | 100499251 | 3q12.2 | 100383894 | 100384320 | 426 | INFERRED | glia maturation factor, beta pseudogene 1 |
| GSTO3P | 344813 | 3q22.1 | 130546482 | 130547277 | 795 | INFERRED | glutathione S-transferase omega 3, pseudogene |
| HMGB1P36 | 100419968 | - | 70803005 | 70803724 | 719 | INFERRED | high mobility group box 1 pseudogene 36 |
| HMGB3P13 | 100289158 | 3q22.2 | 134156448 | 134157033 | 585 | INFERRED | high mobility group box 3 pseudogene 13 |
| HMGN1P7 | 100129555 | 3q11.2 | 93707476 | 93708266 | 790 | MODEL | high mobility group nucleosome binding domain 1 pseudogene 7 |
| HNRNPA1P23 | 100130002 | 3q21.1 | 122036456 | 122037450 | 994 | INFERRED | heterogeneous nuclear ribonucleoprotein A1 pseudogene 23 |
| HSP90AB5P | 442083 | 3p13 | 74150457 | 74152906 | 2449 | INFERRED | heat shock protein 90kDa alpha (cytosolic), class B member 5 (pseudogene) |
| KIAA1257 | 57501 | 3q21.3 | 128689779 | 128712986 | 23207 | PREDICTED | KIAA1257 |
| KIAA1407 | 57577 | 3q13.31 | 113682984 | 113775460 | 92476 | PREDICTED | KIAA1407 |
| KRT8P25 | 402134 | 3p11.2 | 87372346 | 87374056 | 1710 | INFERRED | keratin 8 pseudogene 25 |
| LOC100127892 | 100127892 | 3q13.31 | 113702868 | 113703502 | 634 | INFERRED | ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1 pseudogene |
| LOC100128035 | 100128035 | 3q13.2 | 111576840 | 111578440 | 1600 | NA | VGSA5840 |
| LOC100128045 | 100128045 | 3p12.3 | 75624698 | 75629733 | 5035 | MODEL | hypothetical LOC100128045 |
| LOC100128160 | 100128160 | 3p13 | 70246077 | 70264477 | 18400 | MODEL | hypothetical LOC100128160 |
| LOC100128179 | 100128179 | 3q13.11 | 103723221 | 103782333 | 59112 | MODEL | ras-related protein Rap-1b-like |
| LOC100128733 | 100128733 | 3q13.12 | 106567518 | 106568107 | 589 | INFERRED | FCF1 small subunit (SSU) processome component homolog (S. cerevisiae) pseudogene |
| LOC100129005 | 100129005 | 3p11.2 | 87643956 | 87644534 | 578 | INFERRED | apolipoprotein O pseudogene |
| LOC100129550 | 100129550 | 3q21.1 | 122605360 | 122611263 | 5903 | PREDICTED | hypothetical LOC100129550 |
| LOC100129557 | 100129557 | 3p12.2 | 80265390 | 80266504 | 1114 | MODEL | heterogeneous nuclear ribonucleoprotein A1-like |
| LOC100129736 | 100129736 | 3q11.2 | 96495779 | 96496531 | 752 | INFERRED | CDV3 homolog (mouse) pseudogene |
| LOC100129989 | 100129989 | 3q13.13 | 109106659 | 109116717 | 10058 | MODEL | uncharacterized protein C12orf29 homolog |
| LOC100130326 | 100130326 | 3p12.1 | 84740820 | 84741742 | 922 | INFERRED | transmembrane protein 183A pseudogene |
| LOC100130327 | 100130327 | 3p11.1 | 88650211 | 88650552 | 341 | MODEL | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5-like |
| LOC100130333 | 100130333 | 3q22.1 | 129719098 | 129722233 | 3135 | MODEL | hypothetical LOC100130333 |
| LOC100130484 | 100130484 | 3q11.2 | 98152808 | 98153688 | 880 | INFERRED | ubiquitin family domain containing 1 pseudogene |
| LOC100130550 | 100130550 | 3q22.1 | 132105605 | 132106794 | 1189 | MODEL | g2/M phase-specific E3 ubiquitin-protein ligase-like |
| LOC100130701 | 100130701 | 3q13.33 | 120076665 | 120106964 | 30299 | MODEL | hypothetical protein LOC100130701 |
| LOC100130760 | 100130760 | 3q21.3 | 128764651 | 128765843 | 1192 | INFERRED | jumonji domain containing 4 pseudogene |
| LOC100130821 | 100130821 | 3p12.2 | 80212487 | 80214118 | 1631 | INFERRED | oxysterol binding protein-like 9 pseudogene |
| LOC100130963 | 100130963 | 3q11.2 | 98243877 | 98244156 | 279 | INFERRED | ribosomal protein L38 pseudogene |
| LOC100131117 | 100131117 | 3q13.31 | 114070682 | 114107819 | 37137 | MODEL | hypothetical LOC100131117 |
| LOC100131442 | 100131442 | 3q11.2 | 96472025 | 96473528 | 1503 | INFERRED | regulator of chromosome condensation 2 pseudogene |
| LOC100131568 | 100131568 | 3p14.1 | 69519576 | 69521682 | 2106 | INFERRED | RNA binding motif protein 43 pseudogene |
| LOC100131679 | 100131679 | 3q21.2 | 125581417 | 125606780 | 25363 | MODEL | hypothetical LOC100131679 |
| LOC100131901 | 100131901 | 3p12.3 | 75428323 | 75428649 | 326 | MODEL | putative uncharacterized protein UNQ6125/PRO20090-like |
| LOC100132481 | 100132481 | 3q21.3 | 126426195 | 126427493 | 1298 | MODEL | hypothetical LOC100132481 |
| LOC100287639 | 100287639 | 3q11.2 | 95373814 | 95374561 | 747 | INFERRED | methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene |
| LOC100287852 | 100287852 | 3q12.3 | 101129792 | 101133477 | 3685 | MODEL | protein FAM136A-like |
| LOC100287880 | 100287880 | 3q12.3-q13.11 | 102959833 | 102960078 | 245 | INFERRED | NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa pseudogene |
| LOC100288654 | 100288654 | 3p14.1 | 67564364 | 67564747 | 383 | MODEL | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4-like |
| LOC100288721 | 100288721 | 3q13.13 | 108895291 | 108896213 | 922 | MODEL | hypothetical LOC100288721 |
| LOC100289000 | 100289000 | 3p11.1 | 89636112 | 89636792 | 680 | MODEL | ATP synthase subunit a-like |
| LOC100289095 | 100289095 | 3q22.1 | 131245309 | 131246006 | 697 | INFERRED | BCL2-like 12 (proline rich) pseudogene |
| LOC100289131 | 100289131 | 3p13 | 70800218 | 70800623 | 405 | INFERRED | cytochrome c oxidase subunit VIc pseudogene |
| LOC100310850 | 100310850 | 3q21 | 125534351 | 125535130 | 779 | INFERRED | small nuclear ribonucleoprotein polypeptide C pseudogene |
| LOC100310851 | 100310851 | 3q21 | 129918554 | 129919336 | 782 | INFERRED | small nuclear ribonucleoprotein polypeptide C pseudogene |
| LOC100418920 | 100418920 | - | 98934070 | 98934877 | 807 | INFERRED | actin, gamma 1 pseudogene |
| LOC100419008 | 100419008 | - | 127002924 | 127003484 | 560 | INFERRED | proline rich 20B pseudogene |
| LOC100419070 | 100419070 | - | 129041881 | 129042819 | 938 | INFERRED | nucleoporin 210kDa pseudogene |
| LOC100419178 | 100419178 | - | 81661389 | 81661956 | 567 | INFERRED | SET nuclear oncogene pseudogene |
| LOC100419185 | 100419185 | - | 98501053 | 98502034 | 981 | INFERRED | PDZ and LIM domain 1 pseudogene |
| LOC100419755 | 100419755 | - | 120817955 | 120818754 | 799 | INFERRED | zinc finger protein 426 pseudogene |
| LOC100419877 | 100419877 | - | 108960354 | 108962007 | 1653 | INFERRED | bromodomain containing 7 pseudogene |
| LOC100419878 | 100419878 | - | 126343635 | 126344868 | 1233 | INFERRED | methyltransferase like 5 pseudogene |
| LOC100419966 | 100419966 | - | 125399431 | 125399945 | 514 | INFERRED | hypothetical LOC100419966 |
| LOC100419969 | 100419969 | - | 125399569 | 125400974 | 1405 | INFERRED | myosin light chain kinase pseudogene |
| LOC100420049 | 100420049 | - | 132365965 | 132369238 | 3273 | INFERRED | heat shock 70kDa protein 8 pseudogene |
| LOC100420144 | 100420144 | - | 124340557 | 124341379 | 822 | INFERRED | mediator of cell motility 1 pseudogene |
| LOC100420298 | 100420298 | - | 130646594 | 130647129 | 535 | INFERRED | makorin ring finger protein 1 pseudogene |
| LOC100420300 | 100420300 | - | 72978193 | 72978745 | 552 | INFERRED | ferritin, heavy polypeptide 1 pseudogene |
| LOC100420394 | 100420394 | - | 111352790 | 111353337 | 547 | INFERRED | 5'-nucleotidase, cytosolic III pseudogene |
| LOC100420473 | 100420473 | - | 99940127 | 99942702 | 2575 | INFERRED | dual specificity phosphatase 12 pseudogene |
| LOC100420527 | 100420527 | - | 93794755 | 93796018 | 1263 | INFERRED | retinoblastoma binding protein 4 pseudogene |
| LOC100420528 | 100420528 | - | 113604145 | 113604875 | 730 | INFERRED | dullard homolog (Xenopus laevis) pseudogene |
| LOC100420831 | 100420831 | - | 111904330 | 111904854 | 524 | INFERRED | chromosome 1 open reading frame 106 pseudogene |
| LOC100420832 | 100420832 | - | 130636866 | 130638043 | 1177 | INFERRED | cysteine and glycine-rich protein 2 pseudogene |
| LOC100421090 | 100421090 | - | 126485280 | 126486318 | 1038 | INFERRED | regulator of chromosome condensation 2 pseudogene |
| LOC100421154 | 100421154 | - | 134229369 | 134230243 | 874 | INFERRED | developmental pluripotency associated 4 pseudogene |
| LOC100421376 | 100421376 | - | 108044355 | 108045661 | 1306 | INFERRED | heterogeneous nuclear ribonucleoprotein A1 pseudogene |
| LOC100421437 | 100421437 | - | 125062983 | 125063641 | 658 | INFERRED | DnaJ (Hsp40) homolog, subfamily B, member 7 pseudogene |
| LOC100421499 | 100421499 | - | 128561596 | 128563211 | 1615 | INFERRED | MAP/microtubule affinity-regulating kinase 4 pseudogene |
| LOC100421508 | 100421508 | - | 129064253 | 129064972 | 719 | INFERRED | MAP/microtubule affinity-regulating kinase 2 pseudogene |
| LOC100421580 | 100421580 | - | 100629821 | 100631007 | 1186 | INFERRED | family with sequence similarity 175, member A pseudogene |
| LOC100421636 | 100421636 | - | 122313617 | 122322474 | 8857 | INFERRED | poly (ADP-ribose) polymerase family, member 14 pseudogene |
| LOC100421637 | 100421637 | - | 133479144 | 133481207 | 2063 | INFERRED | acyl-CoA synthetase long-chain family member 3 pseudogene |
| LOC100421670 | 100421670 | - | 117393162 | 117394104 | 942 | INFERRED | developmentally regulated GTP binding protein 1 pseudogene |
| LOC100421731 | 100421731 | - | 113638069 | 113639044 | 975 | INFERRED | vacuolar protein sorting 26 homolog A (S. pombe) pseudogene |
| LOC100421813 | 100421813 | - | 75495916 | 75540354 | 44438 | INFERRED | ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene |
| LOC100421816 | 100421816 | - | 125567066 | 125628257 | 61191 | INFERRED | ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene |
| LOC100422044 | 100422044 | - | 121075838 | 121076791 | 953 | INFERRED | actin related protein 2/3 complex, subunit 1A, 41kDa pseudogene |
| LOC100422385 | 100422385 | - | 109420337 | 109421142 | 805 | INFERRED | DIM1 dimethyladenosine transferase 1-like (S. cerevisiae) pseudogene |
| LOC100506362 | 100506362 | - | 97517923 | 97526596 | 8673 | MODEL | hypothetical LOC100506362 |
| LOC100506377 | 100506377 | - | 98699902 | 98701940 | 2038 | MODEL | hypothetical LOC100506377 |
| LOC100506400 | 100506400 | - | 99644490 | 99644734 | 244 | MODEL | UPF0197 transmembrane protein C11orf10 homolog |
| LOC100506487 | 100506487 | - | 106830332 | 106848845 | 18513 | MODEL | hypothetical LOC100506487 |
| LOC100506506 | 100506506 | - | 108820303 | 108829187 | 8884 | MODEL | hypothetical LOC100506506 |
| LOC100506555 | 100506555 | - | 110764162 | 110788242 | 24080 | MODEL | hypothetical LOC100506555 |
| LOC100506575 | 100506575 | - | 110866294 | 110912386 | 46092 | MODEL | hypothetical LOC100506575 |
| LOC100506591 | 100506591 | - | 112065553 | 112085485 | 19932 | MODEL | hypothetical LOC100506591 |
| LOC100506621 | 100506621 | - | 112315644 | 112319118 | 3474 | MODEL | hypothetical LOC100506621 |
| LOC100506673 | 100506673 | - | 114403427 | 114406469 | 3042 | MODEL | hypothetical LOC100506673 |
| LOC100506708 | 100506708 | - | 116078871 | 116088932 | 10061 | MODEL | hypothetical LOC100506708 |
| LOC100506724 | 100506724 | - | 116640278 | 116651085 | 10807 | MODEL | hypothetical LOC100506724 |
| LOC100506764 | 100506764 | - | 75717379 | 75719188 | 1809 | MODEL | double homeobox protein 4-like |
| LOC100506765 | 100506765 | - | 118661923 | 118666349 | 4426 | MODEL | hypothetical LOC100506765 |
| LOC100506784 | 100506784 | - | 119814477 | 119817871 | 3394 | MODEL | hypothetical LOC100506784 |
| LOC100506815 | 100506815 | - | 71619425 | 71623608 | 4183 | MODEL | hypothetical LOC100506815 |
| LOC100506826 | 100506826 | 3q21 | 123304403 | 123349667 | 45264 | MODEL | hypothetical LOC100506826 |
| LOC100506841 | 100506841 | - | 124443943 | 124445172 | 1229 | MODEL | hypothetical LOC100506841 |
| LOC100506857 | 100506857 | - | 124479943 | 124481532 | 1589 | MODEL | hypothetical LOC100506857 |
| LOC100506865 | 100506865 | - | 72712435 | 72713400 | 965 | MODEL | hypothetical LOC100506865 |
| LOC100506902 | 100506902 | - | 75779112 | 75781280 | 2168 | MODEL | hypothetical LOC100506902 |
| LOC100506907 | 100506907 | - | 126082705 | 126112485 | 29780 | MODEL | hypothetical LOC100506907 |
| LOC100506944 | 100506944 | - | 88387565 | 88514654 | 127089 | MODEL | hypothetical LOC100506944 |
| LOC100506995 | 100506995 | - | 128207952 | 128222050 | 14098 | MODEL | hypothetical LOC100506995 |
| LOC100507015 | 100507015 | - | 129565893 | 129568894 | 3001 | MODEL | hypothetical LOC100507015 |
| LOC100507083 | 100507083 | - | 130012180 | 130012605 | 425 | MODEL | ATP synthase lipid-binding protein, mitochondrial-like |
| LOC100507107 | 100507107 | - | 130724513 | 130734248 | 9735 | MODEL | hypothetical LOC100507107 |
| LOC100507134 | 100507134 | - | 131236675 | 131239724 | 3049 | MODEL | hypothetical LOC100507134 |
| LOC100507182 | 100507182 | - | 133491596 | 133493686 | 2090 | MODEL | hypothetical protein LOC100507182 |
| LOC100507210 | 100507210 | - | 133774094 | 133776492 | 2398 | MODEL | hypothetical LOC100507210 |
| LOC100507224 | 100507224 | - | 134151299 | 134183454 | 32155 | MODEL | hypothetical LOC100507224 |
| LOC151760 | 151760 | 3q13.13 | 110610877 | 110612317 | 1440 | MODEL | hypothetical LOC151760 |
| LOC152225 | 152225 | 3q12.3 | 101659703 | 101716770 | 57067 | PREDICTED | hypothetical LOC152225 |
| LOC201617 | 201617 | 3p14.2 | 72200408 | 72223490 | 23082 | MODEL | hypothetical LOC201617 |
| LOC285232 | 285232 | 3p12.1 | 87098348 | 87102020 | 3672 | INFERRED | phosphoribosyl pyrophosphate amidotransferase pseudogene |
| LOC285286 | 285286 | 3p14.2 | 72084670 | 72149578 | 64908 | MODEL | hypothetical LOC285286 |
| LOC339843 | 339843 | 3q12.1 | 98376646 | 98379411 | 2765 | INFERRED | WW domain containing E3 ubiquitin protein ligase 1 pseudogene |
| LOC339879 | 339879 | 3p12.3 | 75464218 | 75472067 | 7849 | INFERRED | asparagine-linked glycosylation 1 homolog pseudogene |
| LOC344593 | 344593 | 3q13.12 | 106823761 | 106825847 | 2086 | INFERRED | protein tyrosine phosphatase, non-receptor type 11 pseudogene |
| LOC344653 | 344653 | 3p11.1 | 88366241 | 88368171 | 1930 | INFERRED | ATP-binding cassette, sub-family F (GCN20), member 2 pseudogene |
| LOC344709 | 344709 | 3p13 | 73231455 | 73232558 | 1103 | INFERRED | coiled-coil domain containing 75 pseudogene |
| LOC375350 | 375350 | 3p14.1 | 68194142 | 68194923 | 781 | INFERRED | COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis) pseudogene |
| LOC389137 | 389137 | 3q11.2 | 94224397 | 94226494 | 2097 | INFERRED | armadillo repeat containing 10 pseudogene |
| LOC391559 | 391559 | 3q12.1 | 99944218 | 99944914 | 696 | INFERRED | vesicle transport through interaction with t-SNAREs homolog 1B (yeast) pseudogene |
| LOC391562 | 391562 | 3q13.11 | 104221545 | 104222960 | 1415 | INFERRED | ezrin pseudogene |
| LOC391566 | 391566 | 3q13.31 | 113822096 | 113822475 | 379 | MODEL | histone H2B type 1-D-like |
| LOC391578 | 391578 | 3q22.1 | 133209650 | 133210404 | 754 | INFERRED | MAF1 homolog (S. cerevisiae) pseudogene |
| LOC440973 | 440973 | 3q13.13 | 109634831 | 109635787 | 956 | INFERRED | nuclear transcription factor Y, beta pseudogene |
| LOC442087 | 442087 | 3q13.33 | 120025573 | 120026799 | 1226 | INFERRED | prostate tumor overexpressed 1 pseudogene |
| LOC642487 | 642487 | 3p14.1 | 69584789 | 69585690 | 901 | INFERRED | H1 histone family, member O, oocyte-specific pseudogene |
| LOC643255 | 643255 | 3p12.3 | 75707585 | 75708266 | 681 | MODEL | retinoic acid receptor responder protein 2-like |
| LOC644063 | 644063 | 3q11.2 | 96068398 | 96069787 | 1389 | INFERRED | heterogeneous nuclear ribonucleoprotein K pseudogene |
| LOC644662 | 644662 | 3q21.3 | 125985645 | 126010368 | 24723 | MODEL | hypothetical protein LOC644662 |
| LOC644681 | 644681 | 3q13.11 | 103257418 | 103259420 | 2002 | INFERRED | synovial sarcoma, X breakpoint 2 interacting protein pseudogene |
| LOC644950 | 644950 | 3q13.13 | 109128525 | 109130216 | 1691 | MODEL | histone H3.3-like |
| LOC645180 | 645180 | 3q13.31 | 113950248 | 113951868 | 1620 | INFERRED | KIAA1539 pseudogene |
| LOC645207 | 645207 | 3q13.31 | 114997942 | 114998896 | 954 | INFERRED | eukaryotic translation initiation factor 4E family member 2 pseudogene |
| LOC645852 | 645852 | 3q21.3 | 126390952 | 126392066 | 1114 | INFERRED | splicing factor 3a, subunit 2, 66kDa pseudogene |
| LOC646392 | 646392 | 3q22.1 | 132120097 | 132120636 | 539 | INFERRED | nuclear import 7 homolog (S. cerevisiae) pseudogene |
| LOC649024 | 649024 | 3q13.12 | 107046680 | 107048027 | 1347 | INFERRED | citrate synthase pseudogene |
| LOC651856 | 651856 | 3q21.2 | 125485060 | 125488202 | 3142 | MODEL | hypothetical LOC651856 |
| LOC653115 | 653115 | 3p12.3 | 75263610 | 75264799 | 1189 | INFERRED | heterogeneous nuclear ribonucleoprotein A3 pseudogene |
| LOC654340 | 654340 | 3p13 | 70174019 | 70175807 | 1788 | INFERRED | RNA-binding region (RNP1, RRM) containing 3 pseudogene |
| LOC728432 | 728432 | 3p11.1 | 88997548 | 89000075 | 2527 | INFERRED | NMDA receptor regulated 2 pseudogene |
| LOC728873 | 728873 | 3q13.31 | 116745545 | 116745886 | 341 | MODEL | hypothetical LOC728873 |
| LOC729674 | 729674 | 3q22.1 | 131894178 | 131895655 | 1477 | INFERRED | proteasome (prosome, macropain) 26S subunit, ATPase, 2 pseudogene |
| MARK2P3 | 100421507 | - | 129053373 | 129054148 | 775 | INFERRED | MAP/microtubule affinity-regulating kinase 2 pseudogene 3 |
| MARK2P6 | 100421500 | - | 128570463 | 128571851 | 1388 | INFERRED | MAP/microtubule affinity-regulating kinase 2 pseudogene 6 |
| MARK2P8 | 100421498 | - | 128467022 | 128468348 | 1326 | INFERRED | MAP/microtubule affinity-regulating kinase 2 pseudogene 8 |
| MRPS17P3 | 359757 | 3p12.1 | 78574253 | 78574641 | 388 | INFERRED | mitochondrial ribosomal protein S17 pseudogene 3 |
| MYLKP1 | 9430 | 3p13 | 75377699 | 75388223 | 10524 | INFERRED | myosin light chain kinase pseudogene 1 |
| NAP1L1P3 | 100130335 | 3q13.33 | 120524713 | 120525589 | 876 | INFERRED | nucleosome assembly protein 1-like 1 pseudogene 3 |
| NCRNA00119 | 348808 | 3q22.1 | 132441186 | 132593050 | 151864 | PREDICTED | non-protein coding RNA 119 |
| OR5AC1 | 81431 | 3q11.2 | 97783315 | 97784236 | 921 | INFERRED | olfactory receptor, family 5, subfamily AC, member 1 (gene/pseudogene) |
| OR5AC4P | 403271 | 3q11.2 | 97823598 | 97824513 | 915 | INFERRED | olfactory receptor, family 5, subfamily AC, member 4 pseudogene |
| OR5BM1P | 79491 | 3q11.2 | 97771737 | 97772662 | 925 | INFERRED | olfactory receptor, family 5, subfamily BM, member 1 pseudogene |
| OR5H3P | 79309 | 3q12.1 | 97926267 | 97927182 | 915 | INFERRED | olfactory receptor, family 5, subfamily H, member 3 pseudogene |
| OR5H4P | 79299 | 3q12.1 | 97940883 | 97941810 | 927 | INFERRED | olfactory receptor, family 5, subfamily H, member 4 pseudogene |
| OR5H5P | 79297 | 3q12.1 | 97916055 | 97916979 | 924 | INFERRED | olfactory receptor, family 5, subfamily H, member 5 pseudogene |
| OR5H7P | 79291 | 3q12.1 | 97957196 | 97958122 | 926 | INFERRED | olfactory receptor, family 5, subfamily H, member 7 pseudogene |
| OR5H8P | 79289 | 3q12.1 | 98030757 | 98031684 | 927 | INFERRED | olfactory receptor, family 5, subfamily H, member 8 pseudogene |
| OR7E100P | 81430 | 3q13.2 | 112243033 | 112244047 | 1014 | INFERRED | olfactory receptor, family 7, subfamily E, member 100 pseudogene |
| OR7E121P | 402133 | 3p12.3 | 75647801 | 75648823 | 1022 | INFERRED | olfactory receptor, family 7, subfamily E, member 121 pseudogene |
| OR7E129P | 391576 | 3q22.1 | 129740398 | 129741422 | 1024 | INFERRED | olfactory receptor, family 7, subfamily E, member 129 pseudogene |
| OR7E130P | 389144 | 3q21.2 | 125422229 | 125423191 | 962 | INFERRED | olfactory receptor, family 7, subfamily E, member 130 pseudogene |
| OR7E21P | 9432 | 3q21.1 | 129753331 | 129754384 | 1053 | INFERRED | olfactory receptor, family 7, subfamily E, member 21 pseudogene |
| OR7E22P | 9431 | 3p13 | 75405636 | 75406661 | 1025 | INFERRED | olfactory receptor, family 7, subfamily E, member 22 pseudogene |
| OR7E29P | 26644 | 3q21.2 | 125430979 | 125431923 | 944 | INFERRED | olfactory receptor, family 7, subfamily E, member 29 pseudogene |
| OR7E53P | 26478 | 3q21.2 | 125453336 | 125453991 | 655 | INFERRED | olfactory receptor, family 7, subfamily E, member 53 pseudogene |
| OR7E55P | 391548 | 3p12.3 | 75419563 | 75420513 | 950 | INFERRED | olfactory receptor, family 7, subfamily E, member 55 pseudogene |
| OR7E66P | 26614 | 3p13 | 75397394 | 75397915 | 521 | INFERRED | olfactory receptor, family 7, subfamily E, member 66 pseudogene |
| OR7E93P | 79282 | 3q21.2 | 125443277 | 125444447 | 1170 | INFERRED | olfactory receptor, family 7, subfamily E, member 93 pseudogene |
| OR7E97P | 79492 | 3q21.2 | 125465972 | 125466942 | 970 | INFERRED | olfactory receptor, family 7, subfamily E, member 97 pseudogene |
| PHBP8 | 100418804 | - | 119510676 | 119511397 | 721 | INFERRED | prohibitin pseudogene 8 |
| PHF5DP | 450238 | 3q13.2 | 113080809 | 113081655 | 846 | INFERRED | PHD finger protein 5D pseudogene |
| POU5F1P6 | 100009668 | 3q21.3 | 128393489 | 128395453 | 1964 | INFERRED | POU class 5 homeobox 1 pseudogene 6 |
| POU5F1P7 | 100009669 | 3q11.2 | 97838117 | 97838819 | 702 | INFERRED | POU class 5 homeobox 1 pseudogene 7 |
| PPATP1 | 100289640 | 3p12.1 | 87100345 | 87101888 | 1543 | INFERRED | phosphoribosyl pyrophosphate amidotransferase pseudogene 1 |
| PPIAP15 | 5487 | 3q13.13 | 109189927 | 109190726 | 799 | INFERRED | peptidylprolyl isomerase A (cyclophilin A) pseudogene 15 |
| PRKRIRP2 | 100422711 | - | 86061711 | 86064469 | 2758 | INFERRED | protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor) pseudogene 2 |
| PROSP | 5628 | 3p21-cen | 90250256 | 90291222 | 40966 | INFERRED | protein S pseudogene (beta) |
| PSMC1P1 | 151645 | 3p14.1 | 68684836 | 68686393 | 1557 | INFERRED | proteasome (prosome, macropain) 26S subunit, ATPase, 1 pseudogene 1 |
| PSMC1P6 | 643766 | 3p11.2 | 87679261 | 87680815 | 1554 | INFERRED | proteasome (prosome, macropain) 26S subunit, ATPase, 1 pseudogene 6 |
| PSMD12P | 317753 | 3p14 | 72925820 | 72927337 | 1517 | INFERRED | proteasome 26S subunit, non-ATPase, 12 pseudogene |
| RFKP2 | 100132753 | 3q13.2 | 111747750 | 111750523 | 2773 | INFERRED | riboflavin kinase pseudogene 2 |
| RNU7-19P | 100147767 | 3p13 | 73076962 | 73077021 | 59 | INFERRED | RNA, U7 small nuclear 19 pseudogene |
| RPL10P7 | 442086 | 3q13.33 | 119354373 | 119354997 | 624 | INFERRED | ribosomal protein L10 pseudogene 7 |
| RPL13P8 | 100270928 | 3q13.13 | 108262221 | 108262722 | 501 | INFERRED | ribosomal protein L13 pseudogene 8 |
| RPL18AP8 | 644082 | 3q11.2 | 96338113 | 96338718 | 605 | INFERRED | ribosomal protein L18a pseudogene 8 |
| RPL19P7 | 100131527 | 3q12 | 98338920 | 98339540 | 620 | INFERRED | ribosomal protein L19 pseudogene 7 |
| RPL21P41 | 100271159 | 3p14.1 | 66687573 | 66687966 | 393 | INFERRED | ribosomal protein L21 pseudogene 41 |
| RPL23AP49 | 653236 | 3p12.3 | 75673837 | 75674304 | 467 | INFERRED | ribosomal protein L23a pseudogene 49 |
| RPL32P7 | 391560 | 3q12.3 | 101318083 | 101318488 | 405 | INFERRED | ribosomal protein L32 pseudogene 7 |
| RPL34P9 | 100271002 | 3q13.33 | 120231701 | 120232036 | 335 | INFERRED | ribosomal protein L34 pseudogene 9 |
| RPL39P5 | 553117 | 3q22.1 | 134070581 | 134070985 | 404 | INFERRED | ribosomal protein L39 pseudogene 5 |
| RPL7AP11 | 728992 | 3q13.33 | 121212934 | 121213810 | 876 | INFERRED | ribosomal protein L7a pseudogene 11 |
| RPL7AP23 | 100271040 | 3p12.2 | 82368367 | 82368965 | 598 | INFERRED | ribosomal protein L7a pseudogene 23 |
| RPL7P16 | 729677 | 3q22.1 | 131962304 | 131963130 | 826 | INFERRED | ribosomal protein L7 pseudogene 16 |
| RPLP0P8 | 100131151 | 3p14.1 | 68682646 | 68683550 | 904 | INFERRED | ribosomal protein, large, P0 pseudogene 8 |
| RPS10P4 | 728791 | 3q13.31 | 113569035 | 113569617 | 582 | INFERRED | ribosomal protein S10 pseudogene 4 |
| RPS12P6 | 100271054 | 3p12 | 78808128 | 78808519 | 391 | INFERRED | ribosomal protein S12 pseudogene 6 |
| RPS15AP16 | 100271358 | 3q21.3 | 128517683 | 128518044 | 361 | INFERRED | ribosomal protein S15a pseudogene 16 |
| RPS17P9 | 100130823 | 3q22.1 | 129703935 | 129717779 | 13844 | INFERRED | ribosomal protein S17 pseudogene 9 |
| RPS18P5 | 100131863 | 3q12.3 | 101295295 | 101295834 | 539 | INFERRED | ribosomal protein S18 pseudogene 5 |
| RPS18P6 | 100271076 | 3q11.2 | 94890940 | 94891221 | 281 | INFERRED | ribosomal protein S18 pseudogene 6 |
| RPS24P9 | 100132496 | 3q21.2 | 125506491 | 125507093 | 602 | INFERRED | ribosomal protein S24 pseudogene 9 |
| RPS26P21 | 100271105 | 3q13.32-q13.33 | 119017512 | 119017859 | 347 | INFERRED | ribosomal protein S26 pseudogene 21 |
| RPS27P12 | 100271117 | 3q21 | 128936879 | 128937215 | 336 | INFERRED | ribosomal protein S27 pseudogene 12 |
| RPS3AP14 | 729150 | 3q21.2 | 125513925 | 125514772 | 847 | INFERRED | ribosomal protein S3a pseudogene 14 |
| RPS3AP15 | 652670 | 3p12.3 | 75591256 | 75592104 | 848 | INFERRED | ribosomal protein S3a pseudogene 15 |
| RPSAP29 | 389141 | 3q13.13 | 110401063 | 110402084 | 1021 | INFERRED | ribosomal protein SA pseudogene 29 |
| SRRM1P2 | 100420834 | - | 83986207 | 83988189 | 1982 | INFERRED | serine/arginine repetitive matrix 1 pseudogene 2 |
| TMED10P2 | 100129727 | 3q21.3 | 128256860 | 128257474 | 614 | INFERRED | transmembrane emp24-like trafficking protein 10 (yeast) pseudogene 2 |
| TRNAE27P | 100189440 | 3q13.11 | 103879524 | 103879595 | 71 | INFERRED | transfer RNA glutamic acid 27 (anticodon CUC) pseudogene |
| TRNAQ42P | 100189489 | 3q13.12 | 106620878 | 106620949 | 71 | INFERRED | transfer RNA glutamine 42 (anticodon UUG) pseudogene |
| UNC93B3 | 285296 | 3p12.3 | 75668191 | 75673001 | 4810 | INFERRED | unc-93 homolog B3 pseudogene (C. elegans) |
| UQCRHP4 | 100128448 | 3p13 | 70189368 | 70189639 | 271 | INFERRED | ubiquinol-cytochrome c reductase hinge protein pseudogene 4 |
| VDAC1P7 | 100310839 | - | 77365048 | 77366849 | 1801 | INFERRED | voltage-dependent anion channel 1 pseudogene 7 |
| WDR82P1 | 728505 | 3q11.2 | 94654443 | 94657128 | 2685 | INFERRED | WD repeat domain 82 pseudogene 1 |
| ZNF90P1 | 7661 | 3q13 | 101076137 | 101077477 | 1340 | INFERRED | zinc finger protein 90 pseudogene 1 |