Gene Records within SCR3p26.3-3p24.3

Gene GeneID Cytoband Start Position (bp) End Position (bp) Size (bp) Status Description
ANKRD28 23243 3p25.1 15708743 15901053 192310 VALIDATED ankyrin repeat domain 28
ARL8B 55207 3p26.1 5163930 5222601 58671 VALIDATED ADP-ribosylation factor-like 8B
ARPC4 10093 3p25.3 9834227 9848789 14562 REVIEWED actin related protein 2/3 complex, subunit 4, 20kDa
ATG7 10533 3p25.3 11314010 11599139 285129 VALIDATED ATG7 autophagy related 7 homolog (S. cerevisiae)
ATP2B2 491 3p25.3 10365707 10547268 181561 REVIEWED ATPase, Ca++ transporting, plasma membrane 2
BHLHE40 8553 3p26 5021097 5026866 5769 REVIEWED basic helix-loop-helix family, member e40
BRPF1 7862 3p26-p25 9773434 9789699 16265 REVIEWED bromodomain and PHD finger containing, 1
BTD 686 3p25 15643255 15687325 44070 REVIEWED biotinidase
C3orf10 55845 3p25.3 10157333 10168874 11541 VALIDATED chromosome 3 open reading frame 10
C3orf19 51244 3p25.1 14693253 14714166 20913 VALIDATED chromosome 3 open reading frame 19
C3orf20 84077 3p25.1 14716606 14814543 97937 VALIDATED chromosome 3 open reading frame 20
C3orf24 115795 3p25.3 10123004 10149915 26911 VALIDATED chromosome 3 open reading frame 24
C3orf31 132001 3p25.2 11831919 11888352 56433 PROVISIONAL chromosome 3 open reading frame 31
C3orf32 51066 3p26.1 8661317 8693737 32420 PREDICTED chromosome 3 open reading frame 32
C3orf42 84657 3p25.3 10326103 10327430 1327 VALIDATED chromosome 3 open reading frame 42
CAMK1 8536 3p25.3 9799031 9811661 12630 REVIEWED calcium/calmodulin-dependent protein kinase I
CAND2 23066 3p25.2 12838171 12876313 38142 VALIDATED cullin-associated and neddylation-dissociated 2 (putative)
CAPN7 23473 3p24 15247733 15294423 46690 REVIEWED calpain 7
CAV3 859 3p25 8775486 8788451 12965 REVIEWED caveolin 3
CHCHD4 131474 3p25.1 14153577 14166371 12794 VALIDATED coiled-coil-helix-coiled-coil-helix domain containing 4
CHL1 10752 3p26.1 238650 451098 212448 REVIEWED cell adhesion molecule with homology to L1CAM (close homolog of L1)
CIDEC 63924 3p25.3 9908398 9920740 12342 REVIEWED cell death-inducing DFFA-like effector c
CIDECP 152302 3p25.3 10059237 10067820 8583 VALIDATED cell death-inducing DFFA-like effector c pseudogene
CNTN4 152330 3p26.3 2142247 3099645 957398 REVIEWED contactin 4
CNTN6 27255 3p26-p25 1134629 1445278 310649 REVIEWED contactin 6
COL6A4P1 344875 3p25.1 15206869 15247466 40597 PROVISIONAL collagen, type VI, alpha 4 pseudogene 1
COLQ 8292 3p25 15491640 15563258 71618 REVIEWED collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase
CPNE9 151835 3p25.3 9745510 9771592 26082 VALIDATED copine family member IX
CRBN 51185 3p26.2 3191317 3221401 30084 REVIEWED cereblon
CRELD1 78987 3p25.3 9975524 9987097 11573 REVIEWED cysteine-rich with EGF-like domains 1
CYCSP10 360166 3p25.3 10042324 10042631 307 INFERRED cytochrome c, somatic pseudogene 10
CYCSP11 360167 3p25.3 10099246 10100140 894 REVIEWED cytochrome c, somatic pseudogene 11
CYCSP12 360168 3p25.2 11920291 11920594 303 INFERRED cytochrome c, somatic pseudogene 12
DAZL 1618 3p24.3 16628299 16647006 18707 REVIEWED deleted in azoospermia-like
DPH3 285381 3p25.1 16298568 16306496 7928 REVIEWED DPH3, KTI11 homolog (S. cerevisiae)
EAF1 85403 3p25.1 15469064 15484120 15056 VALIDATED ELL associated factor 1
EDEM1 9695 3p26.1 5229359 5261650 32291 VALIDATED ER degradation enhancer, mannosidase alpha-like 1
EGOT 100126791 3p26.1 4790876 4793274 2398 VALIDATED eosinophil granule ontogeny transcript (non-protein coding)
FANCD2 2177 3p26 10068113 10143614 75501 REVIEWED Fanconi anemia, complementation group D2
FBLN2 2199 3p25.1 13590625 13679922 89297 REVIEWED fibulin 2
FGD5 152273 3p25.1 14860469 14976072 115603 VALIDATED FYVE, RhoGEF and PH domain containing 5
GALNTL2 117248 3p25.1 16216184 16271253 55069 VALIDATED UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2
GHRL 51738 3p26-p25 10327434 10334631 7197 REVIEWED ghrelin/obestatin prepropeptide
GHRLOS 100126793 3p25.3 10327438 10335133 7695 VALIDATED ghrelin opposite strand (non-protein coding)
GRIP2 80852 3p24-p23 14530619 14583588 52969 VALIDATED glutamate receptor interacting protein 2
GRM7 2917 3p26.1-p25.1 6902802 7783218 880416 REVIEWED glutamate receptor, metabotropic 7
GSTM5P1 2945 3p25.2 12298875 12299981 1106 VALIDATED glutathione S-transferase mu 5 pseudogene 1
HACL1 26061 3p25.1 15602239 15643130 40891 VALIDATED 2-hydroxyacyl-CoA lyase 1
HDAC11 79885 3p25.1 13521715 13547924 26209 REVIEWED histone deacetylase 11
HMGN2P7 644498 3p25.1 15415760 15417267 1507 INFERRED high mobility group nucleosomal binding domain 2 pseudogene 7
HRH1 3269 3p25 11178779 11304939 126160 REVIEWED histamine receptor H1
IL17RC 84818 3p25.3|3p25.3-p24.1 9958764 9975314 16550 REVIEWED interleukin 17 receptor C
IL17RE 132014 3p25.3 9944296 9958086 13790 REVIEWED interleukin 17 receptor E
IL5RA 3568 3p26-p24 3111401 3152058 40657 REVIEWED interleukin 5 receptor, alpha
IMPDH1P8 131961 3p25.1 15919457 15921802 2345 INFERRED IMP (inosine monophosphate) dehydrogenase 1 pseudogene 8
IQSEC1 9922 3p25.2 12938719 13114617 175898 VALIDATED IQ motif and Sec7 domain 1
IRAK2 3656 3p25.3 10206563 10285427 78864 REVIEWED interleukin-1 receptor-associated kinase 2
ITPR1 3708 3p26.1 4535032 4889524 354492 REVIEWED inositol 1,4,5-triphosphate receptor, type 1
JAGN1 84522 3p25.2 9932271 9936033 3762 VALIDATED jagunal homolog 1 (Drosophila)
KRT18P17 344866 3p25.2 12828834 12830219 1385 INFERRED keratin 18 pseudogene 17
LHFPL4 375323 3p25.3 9540045 9595486 55441 REVIEWED lipoma HMGIC fusion partner-like 4
LMCD1 29995 3p26-p24 8543511 8609806 66295 REVIEWED LIM and cysteine-rich domains 1
LOC100128342 100128342 3p24.3 15503554 15505252 1698 MODEL hypothetical LOC100128342
LOC100128644 100128644 3p25.1 12948885 12949492 607 MODEL LMNE6487
LOC100128772 100128772 3p25.1 13501791 13514100 12309 MODEL proline-rich protein 3-like
LOC100129480 100129480 3p25.2 12578980 12583432 4452 MODEL hypothetical protein LOC100129480
LOC100129618 100129618 3p24.3 16316572 16317546 974 MODEL THAP domain-containing protein 5-like
LOC100129929 100129929 3p25.2 11941485 11942719 1234 INFERRED nucleoporin 210kDa pseudogene
LOC100130207 100130207 3p26.2 3782694 3832392 49698 NA hypothetical LOC100130207
LOC100132260 100132260 3p24.3 16734255 16734939 684 INFERRED chromodomain protein, Y-like pseudogene
LOC100132526 100132526 3p25.1 13974553 13978444 3891 VALIDATED FYVE, RhoGEF and PH domain containing 5 pseudogene
LOC100133039 100133039 3p25.2 11602886 11605949 3063 MODEL hypothetical LOC100133039
LOC100287512 100287512 3p25.1 15182863 15183711 848 INFERRED ribosomal protein S3A pseudogene
LOC100288428 100288428 3p26.1 8262834 8543344 280510 VALIDATED hypothetical LOC100288428
LOC100288506 100288506 3p26.1 4024407 4025979 1572 INFERRED polyribonucleotide nucleotidyltransferase pseudogene
LOC100288831 100288831 3p25.3 9258579 9260213 1634 MODEL hypothetical LOC100288831
LOC100293612 100293612 - 13689246 13695947 6701 MODEL hypothetical LOC100293612
LOC100418921 100418921 - 12111725 12112860 1135 INFERRED actin, gamma 1 pseudogene
LOC100419599 100419599 - 5110312 5110926 614 INFERRED ring finger protein 10 pseudogene
LOC100421239 100421239 - 10034558 10036007 1449 INFERRED Fanconi anemia, complementation group D2 pseudogene
LOC100421503 100421503 - 12898813 12900185 1372 INFERRED MAP/microtubule affinity-regulating kinase 3 pseudogene
LOC100421504 100421504 - 12902186 12903749 1563 INFERRED MAP/microtubule affinity-regulating kinase 4 pseudogene
LOC100421505 100421505 - 12903916 12905103 1187 INFERRED MAP/microtubule affinity-regulating kinase 4 pseudogene
LOC100505557 100505557 - 12299393 12299953 560 MODEL glutathione S-transferase Mu 1-like
LOC100505641 100505641 - 14984287 14989400 5113 MODEL hypothetical LOC100505641
LOC100505673 100505673 - 14961857 14989931 28074 MODEL hypothetical LOC100505673
LOC100505696 100505696 3p25-p24 15295159 15305995 10836 MODEL hypothetical LOC100505696
LOC100505737 100505737 - 15676947 15683820 6873 MODEL hypothetical LOC100505737
LOC100507223 100507223 - 11951078 11952239 1161 MODEL hypothetical LOC100507223
LOC100507273 100507273 - 15186187 15206765 20578 MODEL collagen alpha-4(VI) chain-like
LOC100507529 100507529 - 2403942 2404416 474 MODEL histidine triad nucleotide-binding protein 2, mitochondrial-like
LOC100507555 100507555 - 3842005 3842679 674 MODEL hypothetical LOC100507555
LOC100507582 100507582 3p26 4939910 4948186 8276 VALIDATED hypothetical LOC100507582
LOC100507601 100507601 - 6673245 6847136 173891 MODEL hypothetical LOC100507601
LOC100507618 100507618 - 9435634 9438752 3118 MODEL putative uncharacterized protein FLJ46541-like
LOC100507660 100507660 - 9234219 9236137 1918 MODEL hypothetical LOC100507660
LOC131973 131973 3p25.1 14614359 14616299 1940 INFERRED rhomboid 5 homolog 1 (Drosophila) pseudogene
LOC285370 285370 3p25.3 10801169 10805877 4708 PREDICTED hypothetical LOC285370
LOC285375 285375 3p25.1 13692221 13788132 95911 PREDICTED hypothetical LOC285375
LOC391508 391508 3p25.3 9390127 9390873 746 INFERRED phosphoglycerate mutase 1 (brain) pseudogene
LOC401052 401052 3p25.3 10048102 10052779 4677 PREDICTED hypothetical LOC401052
LOC440944 440944 3p25.3 9430537 9439174 8637 VALIDATED hypothetical LOC440944
LOC442075 442075 3p25.3 10028595 10046944 18349 MODEL hypothetical LOC442075
LOC642891 642891 3p26.3 237441 239090 1649 MODEL hypothetical protein LOC642891
LOC643182 643182 3p26.1 5121263 5126193 4930 INFERRED upstream binding transcription factor, RNA polymerase I pseudogene
LOC643459 643459 3p25.3 9643378 9644409 1031 INFERRED dual specificity phosphatase 5 pseudogene
LOC728143 728143 3p25.3 11275939 11276366 427 MODEL mitochondrial intermembrane space import and assembly protein 40-like
LOH3CR2A 29931 3p25.3 8613468 8615580 2112 PREDICTED loss of heterozygosity, 3, chromosomal region 2, gene A
LRRN1 57633 3p26.2 3841121 3889387 48266 VALIDATED leucine rich repeat neuronal 1
LSM3 27258 3p25.1 14220228 14239869 19641 VALIDATED LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)
MARK2P1 100421501 - 9896589 9897216 627 INFERRED MAP/microtubule affinity-regulating kinase 2 pseudogene 1
MARK2P2 100421502 - 10054068 10054817 749 INFERRED MAP/microtubule affinity-regulating kinase 2 pseudogene 2
METTL6 131965 3p25.1 15451377 15469042 17665 VALIDATED methyltransferase like 6
MIR3134 100422990 - 15738805 15738878 73 PROVISIONAL microRNA 3134
MIR378B 100422933 - 10371913 10371969 56 PROVISIONAL microRNA 378b
MIR4270 100422868 - 15537746 15537815 69 PROVISIONAL microRNA 4270
MIR563 693148 3p25.1 15915278 15915356 78 PROVISIONAL microRNA 563
MIR885 100126334 3p25.3 10436173 10436246 73 PROVISIONAL microRNA 885
MKRN2 23609 3p25 12598594 12625212 26618 PROVISIONAL makorin ring finger protein 2
MRPS10P2 359802 3p26 4456244 4456647 403 REVIEWED mitochondrial ribosomal protein S10 pseudogene 2
MRPS25 64432 3p25 15090019 15106816 16797 REVIEWED mitochondrial ribosomal protein S25
MRPS35P1 339910 3p25.3 5488662 5488789 127 INFERRED mitochondrial ribosomal protein S35 pseudogene 1
MRPS36P1 347705 3p25.3 6814724 6815033 309 INFERRED mitochondrial ribosomal protein S36 pseudogene 1
MTMR14 64419 3p26 9691117 9744078 52961 REVIEWED myotubularin related protein 14
NR2C2 7182 3p25 14989236 15090780 101544 VALIDATED nuclear receptor subfamily 2, group C, member 2
NUP210 23225 3p25.1 13357737 13461809 104072 REVIEWED nucleoporin 210kDa
OGG1 4968 3p26.2 9791628 9808353 16725 REVIEWED 8-oxoguanine DNA glycosylase
OR7E122P 81428 3p25.3 8729920 8730840 920 INFERRED olfactory receptor, family 7, subfamily E, member 122 pseudogene
OXNAD1 92106 3p25-p24 16306667 16347594 40927 VALIDATED oxidoreductase NAD-binding domain containing 1
OXTR 5021 3p25 8792094 8811300 19206 REVIEWED oxytocin receptor
PPARG 5468 3p25 12329349 12475855 146506 REVIEWED peroxisome proliferator-activated receptor gamma
PRRT3 285368 3p25.3 9987226 9994078 6852 VALIDATED proline-rich transmembrane protein 3
RAD18 56852 3p25-p24 8918880 9005159 86279 REVIEWED RAD18 homolog (S. cerevisiae)
RAF1 5894 3p25 12625100 12705700 80600 REVIEWED v-raf-1 murine leukemia viral oncogene homolog 1
RFTN1 23180 3p24.3 16357352 16555222 197870 VALIDATED raftlin, lipid raft linker 1
RPL21P17 727810 3p26.3 1947332 1947853 521 INFERRED ribosomal protein L21 pseudogene 17
RPL23AP38 391504 3p26.3 1637421 1637929 508 INFERRED ribosomal protein L23a pseudogene 38
RPL23AP39 100271461 3p26.3 1771738 1772158 420 INFERRED ribosomal protein L23a pseudogene 39
RPL32 6161 3p25-p24 12876444 12883081 6637 REVIEWED ribosomal protein L32
RPL39P17 100271024 3p25.1 13094274 13094682 408 INFERRED ribosomal protein L39 pseudogene 17
RPS24P10 100271097 3p25 15173343 15173710 367 INFERRED ribosomal protein S24 pseudogene 10
RPS8P6 100270871 3p26.1 350400 351002 602 INFERRED ribosomal protein S8 pseudogene 6
RPSAP32 402123 3p26.3 659472 660040 568 INFERRED ribosomal protein SA pseudogene 32
RPUSD3 285367 3p25.3 9879533 9885702 6169 VALIDATED RNA pseudouridylate synthase domain containing 3
SEC13 6396 3p25-p24 10342615 10362858 20243 REVIEWED SEC13 homolog (S. cerevisiae)
SETD5 55209 3p25.3 9439403 9519838 80435 PROVISIONAL SET domain containing 5
SETMAR 6419 3p26.1 4344988 4358949 13961 VALIDATED SET domain and mariner transposase fusion gene
SH3BP5 9467 3p24.3 15296357 15382901 86544 VALIDATED SH3-domain binding protein 5 (BTK-associated)
SLC6A1 6529 3p25-p24 11034420 11080935 46515 VALIDATED solute carrier family 6 (neurotransmitter transporter, GABA), member 1
SLC6A11 6538 3p25.3 10857917 10980146 122229 PROVISIONAL solute carrier family 6 (neurotransmitter transporter, GABA), member 11
SLC6A6 6533 3p25-p24 14444106 14530857 86751 VALIDATED solute carrier family 6 (neurotransmitter transporter, taurine), member 6
SNORA7A 619563 3p25 12881811 12881949 138 PROVISIONAL small nucleolar RNA, H/ACA box 7A
SRGAP3 9901 3p25.3 9022278 9291311 269033 VALIDATED SLIT-ROBO Rho GTPase activating protein 3
SUMF1 285362 3p26.1 4402829 4508966 106137 REVIEWED sulfatase modifying factor 1
SYN2 6854 3p25 12045862 12233532 187670 REVIEWED synapsin II
TADA3 10474 3p25.3 9821651 9834420 12769 REVIEWED transcriptional adaptor 3
TATDN2 9797 3p25.3 10290177 10322906 32729 VALIDATED TatD DNase domain containing 2
THUMPD3 25917 3p25.3 9404717 9428475 23758 VALIDATED THUMP domain containing 3
TIMP4 7079 3p25 12194568 12200647 6079 REVIEWED TIMP metallopeptidase inhibitor 4
TMEM111 55831 3p25.3 10005636 10028522 22886 PROVISIONAL transmembrane protein 111
TMEM40 55287 3p25.2 12775392 12800808 25416 PROVISIONAL transmembrane protein 40
TMEM43 79188 3p25.1 14166440 14185180 18740 REVIEWED transmembrane protein 43
TPRXL 348825 3p25.1 13978807 14107484 128677 VALIDATED tetra-peptide repeat homeobox-like
TRNASUP4P 100189442 3p25.1 13833886 13833953 67 INFERRED transfer RNA suppressor 4 (anticodon CUA) pseudogene
TRNT1 51095 3p25.1 3168600 3190707 22107 VALIDATED tRNA nucleotidyl transferase, CCA-adding, 1
TSEN2 80746 3p25.2 12525931 12574820 48889 REVIEWED tRNA splicing endonuclease 2 homolog (S. cerevisiae)
TTLL3 26140 3p25.3 9851904 9878040 26136 VALIDATED tubulin tyrosine ligase-like family, member 3
VGLL4 9686 3p25.3 11597544 11762220 164676 VALIDATED vestigial like 4 (Drosophila)
VHL 7428 3p25.3 10183319 10193762 10443 REVIEWED von Hippel-Lindau tumor suppressor
VN1R20P 100312775 3p25.1 13968358 13969257 899 INFERRED vomeronasal 1 receptor 20 pseudogene
VN1R21P 100128368 3p25.1 14130553 14131358 805 INFERRED vomeronasal 1 receptor 21 pseudogene
WNT7A 7476 3p25 13860082 13921618 61536 REVIEWED wingless-type MMTV integration site family, member 7A
XPC 7508 3p25 14186647 14220172 33525 REVIEWED xeroderma pigmentosum, complementation group C
ZFYVE20 64145 3p25.1 15111580 15140655 29075 VALIDATED zinc finger, FYVE domain containing 20

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