Known Genes within SCR5p14.3-5q11.2

Gene GeneID Cytoband Start Position (bp) End Position (bp) Size (bp) Status Description
ADAMTS12 81792 5q35 33527286 33892124 364838 REVIEWED ADAM metallopeptidase with thrombospondin type 1 motif, 12
AGXT2 64902 5p13 34998206 35048240 50034 REVIEWED alanine--glyoxylate aminotransferase 2
AMACR 23600 5p13 33987091 34008220 21129 REVIEWED alpha-methylacyl-CoA racemase
ARL15 54622 5p15.2 53180614 53606403 425789 VALIDATED ADP-ribosylation factor-like 15
BRIX1 55299 5p13.2 34915820 34925787 9967 VALIDATED BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)
C1QTNF3 114899 5p13 34017963 34043317 25354 VALIDATED C1q and tumor necrosis factor related protein 3
C5orf22 55322 5p13.3 31532373 31555165 22792 VALIDATED chromosome 5 open reading frame 22
C5orf28 64417 5p12 43444354 43483992 39638 VALIDATED chromosome 5 open reading frame 28
C5orf33 133686 5p13.2 36192694 36242258 49564 VALIDATED chromosome 5 open reading frame 33
C5orf34 375444 5p12 43486810 43515187 28377 VALIDATED chromosome 5 open reading frame 34
C5orf39 389289 5p12 43039182 43040447 1265 VALIDATED chromosome 5 open reading frame 39
C5orf51 285636 5p13.1 41904470 41921738 17268 VALIDATED chromosome 5 open reading frame 51
C6 729 5p13 41142336 41261540 119204 REVIEWED complement component 6
C7 730 5p13 40909599 40983041 73442 REVIEWED complement component 7
C9 735 5p14-p12 39284377 39364655 80278 REVIEWED complement component 9
CAPSL 133690 5p13.2 35904397 35938881 34484 VALIDATED calcyphosine-like
CARD6 84674 5p13.1 40841410 40855456 14046 REVIEWED caspase recruitment domain family, member 6
CCDC152 100129792 5p12 42756920 42802539 45619 VALIDATED coiled-coil domain containing 152
CCL28 56477 5p12 43381600 43412488 30888 REVIEWED chemokine (C-C motif) ligand 28
CDH10 1008 5p14.2 24487209 24645085 157876 REVIEWED cadherin 10, type 2 (T2-cadherin)
CDH6 1004 5p13.3 31193796 31325237 131441 REVIEWED cadherin 6, type 2, K-cadherin (fetal kidney)
CDH9 1007 5p14 26880709 27038689 157980 REVIEWED cadherin 9, type 2 (T1-cadherin)
DAB2 1601 5p13 39371780 39425335 53555 VALIDATED disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)
DNAJC21 134218 5p13.2 34929698 34959069 29371 VALIDATED DnaJ (Hsp40) homolog, subfamily C, member 21
DROSHA 29102 5p13.3 31400601 31532282 131681 VALIDATED drosha, ribonuclease type III
EGFLAM 133584 5p13.2-p13.1 38258533 38465581 207048 VALIDATED EGF-like, fibronectin type III and laminin G domains
EMB 133418 5q11.1 49692031 49737234 45203 REVIEWED embigin
ESM1 11082 5q11.2 54273695 54281414 7719 REVIEWED endothelial cell-specific molecule 1
FBXO4 26272 5p12 41925356 41941672 16316 REVIEWED F-box protein 4
FGF10 2255 5p13-p12 44305097 44388784 83687 REVIEWED fibroblast growth factor 10
FST 10468 5q11.2 52776595 52781923 5328 REVIEWED follistatin
FYB 2533 5p13.1 39105357 39219667 114310 VALIDATED FYN binding protein
GDNF 2668 5p13.1-p12 37812779 37839782 27003 REVIEWED glial cell derived neurotrophic factor
GHR 2690 5p13-p12 42424026 42721926 297900 REVIEWED growth hormone receptor
GOLPH3 64083 5p13.3 32124824 32174425 49601 REVIEWED golgi phosphoprotein 3 (coat-protein)
HCN1 348980 5p12 45259352 45696220 436868 VALIDATED hyperpolarization activated cyclic nucleotide-gated potassium channel 1
HEATR7B2 133558 5p13.1 40998122 41071444 73322 VALIDATED HEAT repeat family member 7B2
HMGCS1 3157 5p14-p13 43289493 43313595 24102 VALIDATED 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)
HSPB3 8988 5q11.2 53751445 53752207 762 REVIEWED heat shock 27kDa protein 3
IL7R 3575 5p13 35856991 35876924 19933 REVIEWED interleukin 7 receptor
ISL1 3670 5q11.1 50678958 50690564 11606 REVIEWED ISL LIM homeobox 1
ITGA1 3672 5q11.2 52084136 52249485 165349 REVIEWED integrin, alpha 1
ITGA2 3673 5q11.2 52285156 52390609 105453 REVIEWED integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)
KRT18P31 646723 5p13.2 36885261 36886658 1397 REVIEWED keratin 18 pseudogene 31
LIFR 3977 5p13-p12 38475065 38595507 120442 REVIEWED leukemia inhibitory factor receptor alpha
LMBRD2 92255 5p13.2 36103414 36152015 48601 VALIDATED LMBR1 domain containing 2
LOC100132356 100132356 5p12 43065289 43067073 1784 VALIDATED hypothetical LOC100132356
LOC340107 340107 5p14.1 24835389 24840692 5303 VALIDATED hypothetical LOC340107
LOC642366 642366 5q11.1 50672902 50679488 6586 REVIEWED hypothetical LOC642366
LOC646719 646719 5p13.2 36864527 36876796 12269 REVIEWED hypothetical LOC646719
LOC648987 648987 5p12 43014831 43018913 4082 VALIDATED hypothetical LOC648987
LOC728931 728931 5p12 43587052 43588924 1872 VALIDATED adenosylmethionine decarboxylase 1 pseudogene
LOC729862 729862 5p13.3 28926977 28927420 443 VALIDATED striatin, calmodulin binding protein pseudogene
MGC42105 167359 5p12 43192327 43280952 88625 PROVISIONAL serine/threonine-protein kinase NIM1
MIR1274A 100313805 - 41475734 41475804 70 PROVISIONAL microRNA 1274a
MIR4279 100422874 - 31936208 31936265 57 PROVISIONAL microRNA 4279
MIR579 693164 5p13.3 32394484 32394581 97 PROVISIONAL microRNA 579
MIR580 693165 5p13.2 36147994 36148090 96 PROVISIONAL microRNA 580
MIR581 693166 5q11.2 53247334 53247429 95 PROVISIONAL microRNA 581
MOCS2 4338 5q11 52393892 52405598 11706 REVIEWED molybdenum cofactor synthesis 2
MRPS30 10884 5q11 44809027 44815616 6589 REVIEWED mitochondrial ribosomal protein S30
MTMR12 54545 5p13.3 32227111 32313114 86003 REVIEWED myotubularin related protein 12
NDUFS4 4724 5q11.1 52856465 52979171 122706 REVIEWED NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase)
NIPBL 25836 5p13.2 36876861 37065921 189060 REVIEWED Nipped-B homolog (Drosophila)
NNT 23530 5p12 43602791 43705668 102877 REVIEWED nicotinamide nucleotide transhydrogenase
NPR3 4883 5p14-p13 32711665 32787256 75591 REVIEWED natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)
NUP155 9631 5p13.1 37291941 37371197 79256 REVIEWED nucleoporin 155kDa
OSMR 9180 5p13.1 38845960 38935743 89783 REVIEWED oncostatin M receptor
OXCT1 5019 5p13.1 41730167 41870791 140624 REVIEWED 3-oxoacid CoA transferase 1
PAIP1 10605 5p12 43526369 43557521 31152 REVIEWED poly(A) binding protein interacting protein 1
PARP8 79668 5q11.1 49961733 50142356 180623 VALIDATED poly (ADP-ribose) polymerase family, member 8
PDZD2 23037 5p13.3 31799031 32111038 312007 REVIEWED PDZ domain containing 2
PELO 53918 5q11.2 52083774 52098451 14677 REVIEWED pelota homolog (Drosophila)
PLCXD3 345557 5p13.1 41307048 41510730 203682 VALIDATED phosphatidylinositol-specific phospholipase C, X domain containing 3
PRDM9 56979 5p14 23507724 23528706 20982 PROVISIONAL PR domain containing 9
PRKAA1 5562 5p12 40759481 40798297 38816 REVIEWED protein kinase, AMP-activated, alpha 1 catalytic subunit
PRLR 5618 5p13.2 35055802 35230794 174992 REVIEWED prolactin receptor
PSMC6P3 100128218 5p13.2 33970959 33973033 2074 REVIEWED proteasome 26S subunit, ATPase, 6 pseudogene 3
PTGER4 5734 5p13.1 40680032 40693837 13805 REVIEWED prostaglandin E receptor 4 (subtype EP4)
RAD1 5810 5p13.2 34905365 34915780 10415 REVIEWED RAD1 homolog (S. pombe)
RAI14 26064 5p13.3-p13.2 34656433 34832717 176284 VALIDATED retinoic acid induced 14
RANBP3L 202151 5p13.2 36249104 36302011 52907 VALIDATED RAN binding protein 3-like
RICTOR 253260 5p13.1 38938022 39074501 136479 VALIDATED RPTOR independent companion of MTOR, complex 2
RPL17P21 100271151 5q11.2 52199738 52200308 570 REVIEWED ribosomal protein L17 pseudogene 21
RPL37 6167 5p13 40819488 40830556 11068 REVIEWED ribosomal protein L37
RXFP3 51289 5p15.1-p14 33936491 33939023 2532 VALIDATED relaxin/insulin-like family peptide receptor 3
SEPP1 6414 5q31 42799982 42812024 12042 REVIEWED selenoprotein P, plasma, 1
SKP2 6502 5p13 36152189 36184147 31958 REVIEWED S-phase kinase-associated protein 2 (p45)
SLC1A3 6507 5p13 36606457 36688436 81979 REVIEWED solute carrier family 1 (glial high affinity glutamate transporter), member 3
SLC45A2 51151 5p13.2 33944721 33984780 40059 REVIEWED solute carrier family 45, member 2
SNORD72 619564 5p13 40832758 40832837 79 PROVISIONAL small nucleolar RNA, C/D box 72
SNX18 112574 5q11.2 53813589 53842416 28827 REVIEWED sorting nexin 18
SPEF2 79925 5p13.2 35617989 35814713 196724 VALIDATED sperm flagellar 2
SUB1 10923 5p13.3 32585605 32604185 18580 VALIDATED SUB1 homolog (S. cerevisiae)
TARS 6897 5p13.2 33440898 33468196 27298 REVIEWED threonyl-tRNA synthetase
TTC23L 153657 5p13.2 34839269 34899567 60298 VALIDATED tetratricopeptide repeat domain 23-like
TTC33 23548 5p13.1 40711678 40756072 44394 VALIDATED tetratricopeptide repeat domain 33
UGT3A1 133688 5p13.2 35953191 36001130 47939 VALIDATED UDP glycosyltransferase 3 family, polypeptide A1
UGT3A2 167127 5p13.2 36035119 36067023 31904 VALIDATED UDP glycosyltransferase 3 family, polypeptide A2
WDR70 55100 5p13.2 37379412 37752774 373362 PROVISIONAL WD repeat domain 70
ZFR 51663 5p13.3 32354456 32444844 90388 VALIDATED zinc finger RNA binding protein
ZNF131 7690 5p12 43121642 43175836 54194 VALIDATED zinc finger protein 131

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